Variant report

Variant	rs12031203
Chromosome Location	chr1:67696547-67696548
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10489628	0.91[ASN][1000 genomes]
rs10489629	0.81[ASN][1000 genomes]
rs10789228	0.81[ASN][1000 genomes]
rs10889673	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10889674	0.96[ASN][1000 genomes]
rs10889676	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10889677	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11209025	0.81[ASN][1000 genomes]
rs11465802	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12030107	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12030948	1.00[ASN][1000 genomes]
rs12567232	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12743974	0.96[ASN][1000 genomes]
rs1343152	0.99[ASN][1000 genomes]
rs2180294	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2201841	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35380856	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35427944	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4655529	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6665959	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6686950	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7523955	0.82[ASN][1000 genomes]
rs7543633	0.82[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67692800-67702000	Weak transcription	K562	blood
2	chr1:67695600-67696800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:67695600-67696800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:67695800-67696600	Enhancers	HMEC	breast
5	chr1:67695800-67697000	Enhancers	Stomach Mucosa	stomach
6	chr1:67695800-67697400	Enhancers	NHEK	skin
7	chr1:67696000-67697000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr1:67696200-67698000	Weak transcription	Esophagus	oesophagus

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