Variant report

Variant rs112120042
Chromosome Location chr19:52581488-52581489
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52561000-52597400 ZNF genes & repeats Liver Liver
2 chr19:52561000-52597600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:52561200-52586200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr19:52562800-52595400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr19:52562800-52597400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
6 chr19:52563000-52581600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
7 chr19:52563200-52586600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
8 chr19:52563200-52586600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
9 chr19:52563600-52581800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
10 chr19:52563600-52597400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr19:52563800-52597200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr19:52564800-52596200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
13 chr19:52565400-52597200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:52566800-52581600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
15 chr19:52567600-52581600 ZNF genes & repeats Primary B cells from peripheral blood blood
16 chr19:52567600-52581600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
17 chr19:52567600-52581600 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
18 chr19:52568800-52588800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
19 chr19:52569200-52581800 ZNF genes & repeats Colonic Mucosa Colon
20 chr19:52569400-52581800 ZNF genes & repeats Primary T cells fromperipheralblood blood
21 chr19:52571600-52591600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
22 chr19:52574200-52581800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr19:52574200-52597600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr19:52574600-52594200 Strong transcription Stomach Smooth Muscle stomach
25 chr19:52575200-52593000 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr19:52575200-52596400 Strong transcription Muscle Satellite Cultured Cells --
27 chr19:52575800-52581600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr19:52575800-52581800 ZNF genes & repeats Fetal Intestine Small intestine
29 chr19:52575800-52581800 ZNF genes & repeats Ovary ovary
30 chr19:52576400-52584400 Strong transcription Brain Germinal Matrix brain
31 chr19:52576600-52596600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr19:52576800-52592200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr19:52577400-52581600 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
34 chr19:52577400-52583200 Strong transcription HUES64 Cell Line embryonic stem cell
35 chr19:52577600-52581600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr19:52577600-52581600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr19:52577600-52581600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
38 chr19:52577600-52581600 ZNF genes & repeats Lung lung
39 chr19:52577800-52581600 ZNF genes & repeats Esophagus oesophagus
40 chr19:52577800-52581600 Strong transcription Skeletal Muscle Male skeletal muscle
41 chr19:52577800-52582600 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr19:52578200-52581600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr19:52578200-52597800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr19:52578400-52588000 ZNF genes & repeats Duodenum Mucosa Duodenum
45 chr19:52578600-52581800 Strong transcription Brain Hippocampus Middle brain
46 chr19:52579000-52581800 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr19:52579000-52583800 Strong transcription HUVEC blood vessel
48 chr19:52579000-52584200 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr19:52579000-52595600 Strong transcription Osteobl bone
50 chr19:52579400-52581800 Strong transcription Rectal Smooth Muscle rectum

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