The 2.0 version of rSNPBase

Variant report

Variant rs11226909
Chromosome Location chr11:105929861-105929862
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:105920600-105931800 Weak transcription Brain Hippocampus Middle brain
2 chr11:105920800-105947000 Weak transcription Ovary ovary
3 chr11:105921000-105939200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr11:105921400-105931600 Weak transcription Brain Cingulate Gyrus brain
5 chr11:105921400-105931800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr11:105921400-105931800 Weak transcription Brain Anterior Caudate brain
7 chr11:105921400-105946800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:105921400-105946800 Weak transcription Fetal Intestine Small intestine
9 chr11:105921600-105945600 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr11:105922200-105947000 Weak transcription Psoas Muscle Psoas
11 chr11:105922400-105946800 Weak transcription Adipose Nuclei Adipose
12 chr11:105922800-105946800 Weak transcription Primary T cells from cord blood blood
13 chr11:105922800-105947200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr11:105923000-105935200 Weak transcription Right Ventricle heart
15 chr11:105923000-105946800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr11:105923000-105946800 Weak transcription Stomach Smooth Muscle stomach
17 chr11:105923200-105931800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr11:105923200-105931800 Weak transcription Brain Substantia Nigra brain
19 chr11:105923200-105946600 Weak transcription Primary B cells from cord blood blood
20 chr11:105923400-105932000 Weak transcription Brain Angular Gyrus brain
21 chr11:105923800-105946200 Weak transcription Colon Smooth Muscle Colon
22 chr11:105924000-105947000 Weak transcription Primary T cells fromperipheralblood blood
23 chr11:105924400-105947200 Weak transcription Aorta Aorta
24 chr11:105924600-105947000 Weak transcription Left Ventricle heart
25 chr11:105924800-105943600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr11:105925200-105933600 Weak transcription Fetal Intestine Large intestine
27 chr11:105925400-105947000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr11:105925800-105946800 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:105926000-105946800 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr11:105926200-105932000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr11:105926200-105947000 Weak transcription Pancreas Pancrea
32 chr11:105926800-105946800 Weak transcription Primary hematopoietic stem cells blood
33 chr11:105927000-105946800 Weak transcription Rectal Smooth Muscle rectum
34 chr11:105927200-105933000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr11:105927200-105946200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr11:105927200-105946800 Weak transcription Duodenum Mucosa Duodenum
37 chr11:105927800-105947200 Weak transcription Lung lung
38 chr11:105928600-105946800 Weak transcription Liver Liver
39 chr11:105929400-105930400 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr11:105929800-105933800 Weak transcription Primary B cells from peripheral blood blood
41 chr11:105929800-105947000 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015