Variant report

Variant rs11227299
Chromosome Location chr11:65549570-65549571
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65547600-65549600 Active TSS Brain Angular Gyrus brain
2 chr11:65548600-65553400 Weak transcription Gastric stomach
3 chr11:65548800-65549600 Enhancers Primary B cells from peripheral blood blood
4 chr11:65548800-65549600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
5 chr11:65548800-65549600 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr11:65548800-65549800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
7 chr11:65549000-65549600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
8 chr11:65549000-65549600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr11:65549000-65549600 Enhancers Sigmoid Colon Sigmoid Colon
10 chr11:65549000-65549600 Flanking Bivalent TSS/Enh HepG2 liver
11 chr11:65549000-65549800 Bivalent Enhancer Primary T cells fromperipheralblood blood
12 chr11:65549000-65549800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr11:65549000-65550400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
14 chr11:65549000-65551000 Bivalent Enhancer Fetal Thymus thymus
15 chr11:65549000-65553000 Enhancers Placenta Placenta
16 chr11:65549200-65549600 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
17 chr11:65549200-65549600 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
18 chr11:65549200-65549600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
19 chr11:65549200-65549600 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr11:65549200-65549600 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr11:65549200-65549600 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr11:65549200-65549600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr11:65549200-65549600 Enhancers Duodenum Mucosa Duodenum
24 chr11:65549200-65549600 Bivalent Enhancer Fetal Muscle Leg muscle
25 chr11:65549200-65549600 Enhancers Pancreas Pancrea
26 chr11:65549200-65550600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr11:65549200-65550800 Enhancers Placenta Amnion Placenta Amnion
28 chr11:65549200-65550800 Enhancers GM12878-XiMat blood
29 chr11:65549200-65551000 Bivalent Enhancer Thymus Thymus
30 chr11:65549200-65552000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr11:65549200-65552000 Enhancers NHEK skin
32 chr11:65549200-65552200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr11:65549200-65552200 Enhancers HMEC breast
34 chr11:65549200-65552600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr11:65549200-65552600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr11:65549200-65554200 Weak transcription Right Atrium heart
37 chr11:65549400-65549600 Bivalent Enhancer hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr11:65549400-65549600 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
39 chr11:65549400-65549600 Enhancers Primary T helper cells PMA-I stimulated --
40 chr11:65549400-65549600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr11:65549400-65549600 Enhancers Colonic Mucosa Colon
42 chr11:65549400-65549600 Enhancers Fetal Intestine Small intestine
43 chr11:65549400-65549600 Bivalent Enhancer Stomach Smooth Muscle stomach
44 chr11:65549400-65549600 Enhancers Dnd41 blood
45 chr11:65549400-65549600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
46 chr11:65549400-65549800 Bivalent Enhancer H1 Cell Line embryonic stem cell
47 chr11:65549400-65549800 Enhancers Stomach Mucosa stomach
48 chr11:65549400-65550000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
49 chr11:65549400-65550200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr11:65549400-65550400 Bivalent Enhancer Fetal Intestine Large intestine

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