Variant report

Variant	rs11233669
Chromosome Location	chr11:83264707-83264708
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11233674	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12273919	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12290090	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12291733	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12295077	0.84[AFR][1000 genomes]
rs1367986	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35734934	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4100074	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55765915	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58543836	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61519522	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7103498	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83257200-83265600	Weak transcription	Fetal Stomach	stomach
2	chr11:83261600-83266000	Weak transcription	Brain Anterior Caudate	brain
3	chr11:83261800-83265800	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr11:83261800-83277200	Weak transcription	Hela-S3	cervix
5	chr11:83262200-83266200	Weak transcription	Brain Substantia Nigra	brain
6	chr11:83262600-83265800	Weak transcription	Brain Cingulate Gyrus	brain
7	chr11:83262600-83265800	Weak transcription	Fetal Heart	heart
8	chr11:83262800-83265800	Weak transcription	Brain Angular Gyrus	brain
9	chr11:83262800-83265800	Weak transcription	Fetal Lung	lung
10	chr11:83263600-83266000	Weak transcription	Brain Hippocampus Middle	brain
11	chr11:83263600-83266000	Weak transcription	Brain Inferior Temporal Lobe	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links