Variant report

Variant	rs11234627
Chromosome Location	chr11:86098732-86098733
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11234629	0.81[EUR][1000 genomes]
rs148574	0.97[ASN][1000 genomes]
rs17149021	0.83[CHD][hapmap]
rs2847469	0.81[EUR][1000 genomes]
rs2847472	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs291241	0.85[CEU][hapmap]
rs292091	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs292097	0.92[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs292098	0.97[ASN][1000 genomes]
rs292107	0.93[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs292111	0.93[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs56019070	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61904324	0.81[EUR][1000 genomes]
rs61906693	0.81[EUR][1000 genomes]
rs9666855	0.81[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86086000-86102200	Weak transcription	Left Ventricle	heart
2	chr11:86086000-86106200	Weak transcription	Aorta	Aorta
3	chr11:86089400-86099400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr11:86089800-86098800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:86095200-86106200	Weak transcription	Fetal Brain Female	brain
6	chr11:86097600-86105000	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr11:86097800-86098800	Enhancers	NHDF-Ad	bronchial
8	chr11:86098200-86099000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr11:86098200-86105000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr11:86098600-86099600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr11:86098600-86099600	Enhancers	Fetal Brain Male	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links