Variant report

Variant	rs292098
Chromosome Location	chr11:86081119-86081120
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11234627	0.97[ASN][1000 genomes]
rs11234628	0.85[EUR][1000 genomes]
rs148574	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs167109	0.94[EUR][1000 genomes]
rs17149021	0.85[EUR][1000 genomes]
rs292091	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs292097	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs292106	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs292107	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs292111	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86067000-86081200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:86076600-86082400	Weak transcription	NHDF-Ad	bronchial
3	chr11:86080000-86082000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr11:86080600-86081600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:86080600-86081600	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr11:86080600-86081800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr11:86080600-86084200	Enhancers	HMEC	breast
8	chr11:86080800-86082800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr11:86081000-86082000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links