The 2.0 version of rSNPBase

Variant report

Variant rs11239292
Chromosome Location chr10:45450026-45450027
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:45431200-45453200 Weak transcription Gastric stomach
2 chr10:45442000-45451200 Weak transcription Brain Cingulate Gyrus brain
3 chr10:45442400-45451000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr10:45442400-45453400 Weak transcription Osteobl bone
5 chr10:45443400-45454000 Weak transcription Esophagus oesophagus
6 chr10:45443800-45453000 Weak transcription Lung lung
7 chr10:45443800-45453200 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr10:45443800-45454000 Weak transcription Psoas Muscle Psoas
9 chr10:45444000-45451600 Weak transcription Liver Liver
10 chr10:45444400-45453600 Weak transcription Muscle Satellite Cultured Cells --
11 chr10:45445400-45453000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr10:45445600-45451000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr10:45445600-45452800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr10:45445800-45451400 Weak transcription Fetal Stomach stomach
15 chr10:45445800-45453600 Weak transcription Primary hematopoietic stem cells blood
16 chr10:45446000-45451000 Weak transcription Rectal Smooth Muscle rectum
17 chr10:45446000-45453000 Weak transcription Stomach Mucosa stomach
18 chr10:45446000-45453600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr10:45446200-45451000 Weak transcription Stomach Smooth Muscle stomach
20 chr10:45446200-45452400 Weak transcription Pancreas Pancrea
21 chr10:45446200-45453200 Weak transcription Brain Substantia Nigra brain
22 chr10:45446200-45453600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr10:45446400-45451000 Weak transcription Colonic Mucosa Colon
24 chr10:45446400-45451000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr10:45446400-45452200 Weak transcription Duodenum Mucosa Duodenum
26 chr10:45446400-45452800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr10:45446400-45453200 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr10:45446400-45453600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr10:45446400-45453800 Weak transcription Primary B cells from peripheral blood blood
30 chr10:45446600-45451000 Weak transcription Fetal Muscle Trunk muscle
31 chr10:45446600-45451000 Weak transcription Thymus Thymus
32 chr10:45446600-45451200 Weak transcription Fetal Intestine Large intestine
33 chr10:45446600-45452200 Weak transcription GM12878-XiMat blood
34 chr10:45446800-45451600 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr10:45447000-45453800 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr10:45447200-45452200 Weak transcription Aorta Aorta
37 chr10:45447400-45451000 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr10:45447400-45451800 Weak transcription Primary T cells fromperipheralblood blood
39 chr10:45447600-45451200 Weak transcription Fetal Brain Male brain
40 chr10:45447600-45453600 Weak transcription NHLF lung
41 chr10:45447800-45450800 Weak transcription Fetal Brain Female brain
42 chr10:45447800-45451400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr10:45448000-45451200 Strong transcription Primary monocytes fromperipheralblood blood
44 chr10:45448400-45450400 Strong transcription Fetal Thymus thymus
45 chr10:45448400-45451200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr10:45448400-45451200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr10:45448400-45453600 Weak transcription HUVEC blood vessel
48 chr10:45448400-45453800 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr10:45448600-45450200 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr10:45448600-45451200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015