The 2.0 version of rSNPBase

Variant report

Variant rs1123947
Chromosome Location chr15:43625433-43625434
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:43623200-43628200 Weak transcription Esophagus oesophagus
2 chr15:43623200-43628200 Weak transcription Ovary ovary
3 chr15:43623200-43630600 Weak transcription Spleen Spleen
4 chr15:43623200-43631000 Weak transcription Lung lung
5 chr15:43623200-43631000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr15:43623200-43633600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr15:43623200-43651000 Weak transcription Placenta Amnion Placenta Amnion
8 chr15:43623200-43651600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr15:43623200-43651600 Weak transcription Pancreas Pancrea
10 chr15:43623400-43625600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr15:43623400-43628200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr15:43623400-43628200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr15:43623400-43628200 Weak transcription Fetal Muscle Trunk muscle
14 chr15:43623400-43629600 Weak transcription Primary T cells fromperipheralblood blood
15 chr15:43623400-43629600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr15:43623400-43630000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr15:43623400-43630800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr15:43623400-43631200 Weak transcription Placenta Placenta
19 chr15:43623400-43632800 Weak transcription Aorta Aorta
20 chr15:43623400-43639600 Weak transcription Fetal Kidney kidney
21 chr15:43623400-43641200 Weak transcription Colonic Mucosa Colon
22 chr15:43623400-43644000 Weak transcription Fetal Thymus thymus
23 chr15:43623400-43649200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:43623400-43650400 Weak transcription Fetal Brain Male brain
25 chr15:43623400-43651000 Weak transcription Gastric stomach
26 chr15:43623400-43651000 Weak transcription Small Intestine intestine
27 chr15:43623400-43653200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr15:43623600-43625600 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr15:43623600-43625800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr15:43623600-43625800 Weak transcription Primary B cells from cord blood blood
31 chr15:43623600-43626200 Weak transcription Left Ventricle heart
32 chr15:43623600-43627000 Weak transcription Brain Inferior Temporal Lobe brain
33 chr15:43623600-43627400 Weak transcription Fetal Intestine Small intestine
34 chr15:43623600-43627400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr15:43623600-43627600 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr15:43623600-43627600 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr15:43623600-43628000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr15:43623600-43628000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr15:43623600-43628000 Weak transcription Brain Angular Gyrus brain
40 chr15:43623600-43628000 Weak transcription Brain Hippocampus Middle brain
41 chr15:43623600-43628200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr15:43623600-43628600 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr15:43623600-43628800 Weak transcription Muscle Satellite Cultured Cells --
44 chr15:43623600-43629000 Weak transcription Colon Smooth Muscle Colon
45 chr15:43623600-43629400 Weak transcription Osteobl bone
46 chr15:43623600-43629600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr15:43623600-43629600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr15:43623600-43629600 Weak transcription Fetal Lung lung
49 chr15:43623600-43629800 Weak transcription Primary B cells from peripheral blood blood
50 chr15:43623600-43629800 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015