Variant report

Variant	rs3809482
Chromosome Location	chr15:43661802-43661803
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HCFC1	chr15:43661352-43665311	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr15:43661060-43663929	Hela-S3	cervix:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:43661645..43664142-chr15:43669573..43672436,3	MCF-7	breast:
2	chr15:43621444..43623700-chr15:43661759..43663409,2	MCF-7	breast:
3	chr15:43660016..43662796-chr15:43702586..43705983,3	K562	blood:
4	chr15:43618581..43624264-chr15:43661265..43664929,7	MCF-7	breast:
5	chr15:43620486..43624109-chr15:43661175..43665421,4	K562	blood:

No data

Variant related genes	Relation type
TUBGCP4	TF binding region
ENSG00000168803	Chromatin interaction
ENSG00000168806	Chromatin interaction
ENSG00000067369	Chromatin interaction
ENSG00000137822	Chromatin interaction

Extended variants
information (count: 177 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:175)

rs_ID	r²[population]
rs1058298	0.83[EUR][1000 genomes]
rs1060939	1.00[ASW][hapmap];0.91[CEU][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.81[TSI][hapmap]
rs1079309	1.00[ASW][hapmap];1.00[CEU][hapmap];0.98[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.95[TSI][hapmap];0.89[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs1095386	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs11070399	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1123947	1.00[ASN][1000 genomes]
rs1133395	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11637572	0.84[CEU][hapmap];0.86[CHB][hapmap];0.85[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs11853991	0.87[MEX][hapmap]
rs11858152	0.97[ASN][1000 genomes]
rs12101673	0.98[ASN][1000 genomes]
rs12102205	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12148735	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12323999	0.92[ASN][1000 genomes]
rs12324572	1.00[ASN][1000 genomes]
rs12324584	0.92[ASN][1000 genomes]
rs12905772	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1549523	1.00[ASN][1000 genomes]
rs1549525	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16957627	1.00[ASN][1000 genomes]
rs16957630	1.00[ASN][1000 genomes]
rs16957632	1.00[ASN][1000 genomes]
rs1814323	0.91[MEX][hapmap];0.83[AMR][1000 genomes]
rs1837959	1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs1837960	1.00[CHB][hapmap];0.98[CHD][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs1869258	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.88[TSI][hapmap];0.81[AMR][1000 genomes]
rs2012467	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2242068	0.84[ASN][1000 genomes]
rs2243434	1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs2244746	0.87[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2244981	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2249952	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2253268	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes]
rs2253807	0.85[AMR][1000 genomes]
rs2255410	0.91[CEU][hapmap]
rs2255663	0.91[CEU][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.81[TSI][hapmap]
rs2264050	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2278856	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2278857	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2278859	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2278860	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412778	1.00[ASN][1000 genomes]
rs2412779	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412780	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2412781	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2412782	0.90[ASN][1000 genomes]
rs2439845	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2439846	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2444036	1.00[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs2444037	0.84[EUR][1000 genomes]
rs2444251	1.00[CEU][hapmap];0.98[GIH][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2467733	0.89[ASN][1000 genomes]
rs2467737	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2467738	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2467741	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2467742	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2467745	1.00[CEU][hapmap];0.91[GIH][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2584700	0.85[AFR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2584701	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2584702	0.92[ASN][1000 genomes]
rs2584703	0.87[ASN][1000 genomes]
rs2602141	1.00[CEU][hapmap];0.91[GIH][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs28415933	1.00[ASN][1000 genomes]
rs28461955	1.00[ASN][1000 genomes]
rs28649346	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28653441	0.95[ASN][1000 genomes]
rs28702649	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28729853	0.95[ASN][1000 genomes]
rs2899082	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2924369	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs3213990	1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[ASN][1000 genomes]
rs3213991	0.97[ASN][1000 genomes]
rs3742969	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs3742971	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs4075674	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4296223	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4401024	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4547312	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4583210	1.00[ASN][1000 genomes]
rs471122	0.87[MEX][hapmap]
rs475227	0.80[AMR][1000 genomes]
rs478028	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs478104	0.91[CHB][hapmap];0.93[CHD][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs480108	0.91[CEU][hapmap]
rs484029	1.00[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs484846	0.92[ASN][1000 genomes]
rs485148	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs488756	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs491800	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs493177	0.91[MEX][hapmap]
rs493377	1.00[CEU][hapmap];0.95[GIH][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.80[AMR][1000 genomes]
rs493444	0.83[AMR][1000 genomes]
rs498837	0.92[ASN][1000 genomes]
rs499035	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs501884	0.83[AMR][1000 genomes]
rs504417	0.91[MEX][hapmap];0.83[AMR][1000 genomes]
rs505249	0.83[AMR][1000 genomes]
rs506120	0.91[CEU][hapmap];0.95[GIH][hapmap];0.91[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.80[AMR][1000 genomes]
rs507178	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs509306	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs510108	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs511673	0.99[ASN][1000 genomes]
rs512431	0.81[AMR][1000 genomes]
rs512628	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs513970	0.84[AMR][1000 genomes]
rs518288	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs523156	0.87[CEU][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap]
rs523737	0.83[AMR][1000 genomes]
rs524527	0.91[CHB][hapmap];0.95[CHD][hapmap];0.90[JPT][hapmap]
rs526450	0.91[CHB][hapmap];0.93[CHD][hapmap];0.90[JPT][hapmap]
rs528517	0.97[ASN][1000 genomes]
rs529611	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.88[TSI][hapmap];0.80[AFR][1000 genomes]
rs530188	0.83[AMR][1000 genomes]
rs530683	0.87[MEX][hapmap]
rs531910	0.87[MEX][hapmap]
rs536313	1.00[CEU][hapmap];0.89[GIH][hapmap];0.96[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs538238	1.00[ASW][hapmap];0.91[CEU][hapmap];0.86[CHD][hapmap];1.00[LWK][hapmap];0.88[TSI][hapmap];0.87[EUR][1000 genomes]
rs540031	0.97[ASN][1000 genomes]
rs542898	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs546722	0.91[MEX][hapmap]
rs548704	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs552701	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs554001	0.83[AMR][1000 genomes]
rs555001	0.87[MEX][hapmap]
rs556851	0.83[AMR][1000 genomes]
rs560134	0.83[AMR][1000 genomes]
rs560191	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs567357	0.83[AMR][1000 genomes]
rs572837	1.00[ASW][hapmap];0.91[CEU][hapmap];0.91[MEX][hapmap];0.81[TSI][hapmap]
rs572959	0.83[AMR][1000 genomes]
rs573615	1.00[ASW][hapmap];0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs574065	0.87[MEX][hapmap]
rs576557	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6493081	0.99[ASN][1000 genomes]
rs6493082	1.00[ASN][1000 genomes]
rs6493083	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493084	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493085	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6493086	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493087	1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs6493088	0.97[ASN][1000 genomes]
rs689693	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs689767	1.00[CEU][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs689797	0.91[CEU][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.81[TSI][hapmap]
rs690012	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs690276	1.00[CEU][hapmap];0.89[GIH][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs690367	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs690446	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs690472	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs690512	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs693510	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs694725	1.00[CEU][hapmap];0.95[GIH][hapmap];0.96[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7163245	0.95[ASN][1000 genomes]
rs7163288	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.98[TSI][hapmap]
rs7165471	1.00[ASN][1000 genomes]
rs7166812	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7167882	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7168940	0.97[ASN][1000 genomes]
rs7170152	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7170489	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7172374	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7175434	0.99[ASN][1000 genomes]
rs7176849	1.00[CHB][hapmap];0.86[JPT][hapmap];0.92[ASN][1000 genomes]
rs8033714	0.96[ASN][1000 genomes]
rs8039638	1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.97[ASN][1000 genomes]
rs8041132	1.00[ASN][1000 genomes]
rs8042688	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs825739	0.86[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs825740	0.86[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs884704	1.00[CHB][hapmap];0.98[CHD][hapmap];0.91[JPT][hapmap];0.90[ASN][1000 genomes]
rs933941	1.00[ASN][1000 genomes]
rs956391	0.98[ASN][1000 genomes]
rs9920879	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs999026	0.90[ASN][1000 genomes]
rs999047	1.00[CHB][hapmap];0.98[CHD][hapmap];0.91[JPT][hapmap];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534649	chr15:43591116-43851142	Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	esv1846172	chr15:43632138-44116986	Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs3809482	CKMT1A	cis	Esophagus Mucosa	GTEx
rs3809482	ADAL	cis	Nerve Tibial	GTEx
rs3809482	ZSCAN29	cis	lymphoblastoid	seeQTL
rs3809482	WDR76	cis	parietal	SCAN
rs3809482	ZSCAN29	cis	multi-tissue	Pritchard
rs3809482	AC011330.5	cis	Artery Tibial	GTEx
rs3809482	TGM5	cis	multi-tissue	Pritchard
rs3809482	TGM7	cis	Esophagus Mucosa	GTEx
rs3809482	TGM5	cis	lymphoblastoid	seeQTL
rs3809482	AC011330.5	cis	Thyroid	GTEx
rs3809482	ZSCAN29	cis	Thyroid	GTEx
rs3809482	STRCP1	cis	Esophagus Muscularis	GTEx
rs3809482	TP53BP1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:43654400-43662000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr15:43659200-43662200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr15:43659800-43662000	Weak transcription	Aorta	Aorta
4	chr15:43659800-43662000	Weak transcription	Esophagus	oesophagus
5	chr15:43660000-43662000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr15:43660000-43662000	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr15:43660000-43662000	Weak transcription	NH-A	brain
8	chr15:43660000-43662000	Weak transcription	Osteobl	bone
9	chr15:43660000-43662200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr15:43660200-43662000	Weak transcription	Fetal Kidney	kidney
11	chr15:43661000-43662000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr15:43661000-43662000	Transcr. at gene 5' and 3'	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr15:43661000-43662000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
14	chr15:43661000-43662000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
15	chr15:43661000-43662000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr15:43661000-43662000	Genic enhancers	Cortex derived primary cultured neurospheres	brain
17	chr15:43661000-43662000	Enhancers	Brain Angular Gyrus	brain
18	chr15:43661000-43662000	Enhancers	Duodenum Mucosa	Duodenum
19	chr15:43661000-43662000	Genic enhancers	Fetal Muscle Leg	muscle
20	chr15:43661000-43662000	Enhancers	Fetal Thymus	thymus
21	chr15:43661000-43662000	Enhancers	Left Ventricle	heart
22	chr15:43661000-43662000	Enhancers	Thymus	Thymus
23	chr15:43661000-43662000	ZNF genes & repeats	A549	lung
24	chr15:43661000-43662200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
25	chr15:43661000-43662200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
26	chr15:43661000-43662200	Enhancers	Liver	Liver
27	chr15:43661000-43662200	Enhancers	Gastric	stomach
28	chr15:43661000-43662200	Enhancers	Ovary	ovary
29	chr15:43661000-43662200	Enhancers	Sigmoid Colon	Sigmoid Colon
30	chr15:43661000-43662200	Enhancers	Small Intestine	intestine
31	chr15:43661000-43662200	Enhancers	Stomach Mucosa	stomach
32	chr15:43661000-43662400	Enhancers	Primary B cells from peripheral blood	blood
33	chr15:43661000-43662400	Enhancers	Lung	lung
34	chr15:43661000-43662400	Flanking Active TSS	Stomach Smooth Muscle	stomach
35	chr15:43661000-43662600	Enhancers	Spleen	Spleen
36	chr15:43661000-43662600	Flanking Active TSS	GM12878-XiMat	blood
37	chr15:43661000-43662800	Flanking Active TSS	Dnd41	blood
38	chr15:43661000-43662800	Flanking Active TSS	Hela-S3	cervix
39	chr15:43661200-43662000	Enhancers	Primary T helper naive cells from peripheral blood	blood
40	chr15:43661200-43662000	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr15:43661200-43662000	Genic enhancers	Fetal Muscle Trunk	muscle
42	chr15:43661200-43662000	Enhancers	HUVEC	blood vessel
43	chr15:43661200-43662200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
44	chr15:43661200-43662200	Genic enhancers	Fetal Stomach	stomach
45	chr15:43661200-43662200	Enhancers	Pancreas	Pancrea
46	chr15:43661200-43662400	Enhancers	Primary T cells fromperipheralblood	blood
47	chr15:43661200-43662400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
48	chr15:43661200-43662400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
49	chr15:43661400-43662000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
50	chr15:43661400-43662000	Enhancers	Colon Smooth Muscle	Colon

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