Variant report

Variant	rs529611
Chromosome Location	chr15:43805988-43805989
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr15:43805661-43806300	HUVEC	blood vessel:	n/a	chr15:43805953-43805964
2	RAD21	chr15:43805930-43807228	SK-N-SH	brain:	n/a	chr15:43806873-43806892 chr15:43806883-43806890 chr15:43806805-43806817
3	STAT3	chr15:43805876-43806074	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:43622234..43624914-chr15:43804898..43807487,3	K562	blood:
2	15:43802874-43806906..15:44001645-44015047	Hela-S3	cervix:
3	chr15:43803384..43806357-chr15:43806530..43809692,3	MCF-7	breast:

Variant related genes	Relation type
TP53BP1	TF binding region
MAP1A	TF binding region
ENSG00000168806	Chromatin interaction
ENSG00000166763	Chromatin interaction
ENSG00000168803	Chromatin interaction
ENSG00000242866	Chromatin interaction
ENSG00000238494	Chromatin interaction

Extended variants
information (count: 160 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:153)

rs_ID	r²[population]
rs101094	0.88[ASN][1000 genomes]
rs1060939	0.86[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1079309	0.86[ASW][hapmap];0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1133395	0.80[AFR][1000 genomes]
rs11637572	0.85[AFR][1000 genomes]
rs11858640	0.88[ASN][1000 genomes]
rs12905772	0.91[CEU][hapmap]
rs1814538	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs1869258	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2012467	0.85[AFR][1000 genomes]
rs2242069	0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2244981	0.86[ASW][hapmap];0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2245054	0.88[ASN][1000 genomes]
rs2245176	0.88[ASN][1000 genomes]
rs2245664	0.86[ASN][1000 genomes]
rs2245715	0.91[CHD][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs2245780	0.88[ASN][1000 genomes]
rs2245785	0.81[ASN][1000 genomes]
rs2245790	0.88[ASN][1000 genomes]
rs2245908	0.86[ASN][1000 genomes]
rs2249952	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2250743	0.87[ASN][1000 genomes]
rs2250750	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2251538	0.88[ASN][1000 genomes]
rs2251844	0.84[ASN][1000 genomes]
rs2253268	0.86[ASW][hapmap];0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2253708	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2253807	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2254321	0.84[ASN][1000 genomes]
rs2254325	0.83[ASN][1000 genomes]
rs2254927	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2255042	0.85[ASN][1000 genomes]
rs2255051	0.81[ASN][1000 genomes]
rs2255383	0.88[ASN][1000 genomes]
rs2255410	1.00[CEU][hapmap];0.95[JPT][hapmap];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2255440	0.91[CHD][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs2255663	1.00[CEU][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.93[TSI][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2264049	0.87[ASN][1000 genomes]
rs2264050	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2264239	0.88[ASN][1000 genomes]
rs2264248	0.85[ASN][1000 genomes]
rs2264876	0.91[CHB][hapmap];0.90[CHD][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs2278856	0.80[AFR][1000 genomes]
rs2278857	0.86[ASW][hapmap];0.87[CEU][hapmap];0.87[MEX][hapmap];0.88[TSI][hapmap]
rs2412781	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.88[TSI][hapmap];0.80[AFR][1000 genomes]
rs2439831	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2439832	0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2439836	0.88[ASN][1000 genomes]
rs2439839	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2439841	0.85[ASN][1000 genomes]
rs2439843	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2439845	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2439846	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2439848	0.88[ASN][1000 genomes]
rs2439850	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2444028	0.88[ASN][1000 genomes]
rs2444029	0.87[ASN][1000 genomes]
rs2444032	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2444244	0.84[ASN][1000 genomes]
rs2444247	0.88[ASN][1000 genomes]
rs2444249	0.86[ASN][1000 genomes]
rs2444250	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2444251	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.93[TSI][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2467736	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2467737	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2467738	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2467739	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs2467740	0.88[ASN][1000 genomes]
rs2467741	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2467742	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2467743	0.88[ASN][1000 genomes]
rs2467745	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2470130	0.85[ASN][1000 genomes]
rs2470131	0.85[ASN][1000 genomes]
rs2584694	0.83[ASN][1000 genomes]
rs2584700	0.85[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs2584706	0.88[ASN][1000 genomes]
rs2584725	0.93[ASN][1000 genomes]
rs2584726	0.86[ASN][1000 genomes]
rs2584727	0.84[ASN][1000 genomes]
rs2602141	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2614832	1.00[YRI][hapmap]
rs28649346	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28666488	0.88[ASN][1000 genomes]
rs2915788	0.81[ASN][1000 genomes]
rs2924368	0.86[ASN][1000 genomes]
rs2924369	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2927071	0.83[MEX][hapmap];0.81[TSI][hapmap]
rs3097773	0.85[CHD][hapmap];0.91[JPT][hapmap]
rs3809482	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.88[TSI][hapmap];0.80[AFR][1000 genomes]
rs4296223	0.91[CEU][hapmap];0.81[GIH][hapmap];0.91[MEX][hapmap];0.88[TSI][hapmap]
rs4547312	0.87[CEU][hapmap];0.88[MEX][hapmap];0.88[TSI][hapmap]
rs471229	0.88[ASN][1000 genomes]
rs475486	0.81[ASN][1000 genomes]
rs478028	0.82[CEU][hapmap]
rs480108	1.00[CEU][hapmap];0.95[JPT][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs483724	0.88[ASN][1000 genomes]
rs486301	0.84[ASN][1000 genomes]
rs493377	0.91[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs495175	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs496584	0.91[CHD][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs506120	0.91[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs507178	0.82[CEU][hapmap]
rs509306	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs518288	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs523156	0.96[CEU][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.88[TSI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs524417	0.88[ASN][1000 genomes]
rs526083	0.82[ASN][1000 genomes]
rs536313	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[MKK][hapmap];0.93[TSI][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs537115	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs542898	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs548704	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs550239	0.86[ASN][1000 genomes]
rs558656	0.86[ASN][1000 genomes]
rs560191	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs561863	0.88[ASN][1000 genomes]
rs565007	0.86[ASN][1000 genomes]
rs570933	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs572837	0.86[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs573615	0.86[ASW][hapmap];0.83[CEU][hapmap];0.87[MEX][hapmap];0.93[MKK][hapmap];0.88[TSI][hapmap]
rs6493083	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.91[MKK][hapmap];0.88[TSI][hapmap];0.80[AFR][1000 genomes]
rs689596	0.87[ASN][1000 genomes]
rs689616	0.88[ASN][1000 genomes]
rs689647	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs689693	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs689754	0.86[CHB][hapmap]
rs689767	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs689781	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs689797	1.00[CEU][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.93[TSI][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs689816	0.80[AMR][1000 genomes]
rs689826	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs689835	0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs689883	0.88[ASN][1000 genomes]
rs690002	0.80[ASN][1000 genomes]
rs690012	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs690038	0.83[ASN][1000 genomes]
rs690263	0.83[ASN][1000 genomes]
rs690276	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs690316	0.91[CHB][hapmap];0.85[CHD][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs690367	0.86[ASW][hapmap];0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.93[TSI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs690436	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs690446	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs690466	0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs690472	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs690512	0.91[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs693510	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs694725	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.95[MKK][hapmap];0.93[TSI][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs694985	0.91[CHD][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs7163288	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap]
rs7166812	0.80[AFR][1000 genomes]
rs7167882	0.81[AMR][1000 genomes]
rs7497780	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9920879	0.86[ASW][hapmap];0.91[CEU][hapmap];0.81[GIH][hapmap];0.91[MEX][hapmap];0.88[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534649	chr15:43591116-43851142	Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	esv1846172	chr15:43632138-44116986	Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
3	esv1846701	chr15:43759774-44116986	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
4	nsv437799	chr15:43784000-43989518	Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
5	nsv515877	chr15:43802024-43818052	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv518707	chr15:43802024-43826557	Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	nsv832988	chr15:43804641-43976862	Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs529611	CKMT1A	cis	Esophagus Mucosa	GTEx
rs529611	STRCP1	cis	Esophagus Muscularis	GTEx
rs529611	ZSCAN29	cis	multi-tissue	Pritchard
rs529611	TGM7	cis	Esophagus Mucosa	GTEx
rs529611	AC011330.5	cis	Artery Tibial	GTEx
rs529611	TGM5	cis	multi-tissue	Pritchard
rs529611	ZSCAN29	cis	Thyroid	GTEx
rs529611	AC011330.5	cis	Thyroid	GTEx
rs529611	TGM5	cis	lymphoblastoid	seeQTL

Chromatin state (count:85 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:43802400-43806400	Weak transcription	Small Intestine	intestine
2	chr15:43803600-43808400	Weak transcription	Psoas Muscle	Psoas
3	chr15:43803600-43809400	Weak transcription	Aorta	Aorta
4	chr15:43803600-43809400	Weak transcription	Lung	lung
5	chr15:43803800-43806000	Enhancers	K562	blood
6	chr15:43803800-43808400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr15:43803800-43808400	Weak transcription	Esophagus	oesophagus
8	chr15:43803800-43808600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr15:43803800-43809000	Weak transcription	Right Atrium	heart
10	chr15:43804000-43806000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
11	chr15:43804000-43806000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr15:43804000-43806000	Weak transcription	NH-A	brain
13	chr15:43804000-43806400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr15:43804000-43806400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr15:43804000-43806400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr15:43804000-43806400	Weak transcription	Left Ventricle	heart
17	chr15:43804000-43806600	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr15:43804000-43808000	Weak transcription	Ovary	ovary
19	chr15:43804000-43808000	Weak transcription	Right Ventricle	heart
20	chr15:43804000-43808000	Weak transcription	Spleen	Spleen
21	chr15:43804000-43808200	Weak transcription	Fetal Heart	heart
22	chr15:43804000-43808200	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr15:43804000-43809200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr15:43804000-43809200	Weak transcription	Duodenum Mucosa	Duodenum
25	chr15:43804000-43810000	Weak transcription	A549	lung
26	chr15:43804200-43806000	Weak transcription	Primary T cells from cord blood	blood
27	chr15:43804200-43806000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr15:43804200-43806000	Enhancers	Dnd41	blood
29	chr15:43804200-43806000	Enhancers	NHLF	lung
30	chr15:43804200-43806200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
31	chr15:43804200-43806200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr15:43804200-43806200	Weak transcription	Colon Smooth Muscle	Colon
33	chr15:43804200-43806400	Weak transcription	Primary T cells fromperipheralblood	blood
34	chr15:43804200-43806400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
35	chr15:43804200-43808200	Weak transcription	Fetal Brain Female	brain
36	chr15:43804200-43808400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr15:43804200-43808400	Weak transcription	Hela-S3	cervix
38	chr15:43804200-43809400	Enhancers	Fetal Thymus	thymus
39	chr15:43804400-43806000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr15:43804400-43806200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
41	chr15:43804400-43808000	Weak transcription	Stomach Smooth Muscle	stomach
42	chr15:43804400-43808200	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr15:43804400-43809200	Weak transcription	Pancreatic Islets	Pancreatic Islet
44	chr15:43804600-43806000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
45	chr15:43804600-43806000	Weak transcription	Fetal Brain Male	brain
46	chr15:43804600-43806000	Enhancers	HSMMtube	muscle
47	chr15:43804600-43806200	Enhancers	Brain Angular Gyrus	brain
48	chr15:43804600-43806200	Enhancers	Brain Cingulate Gyrus	brain
49	chr15:43804800-43806000	Enhancers	Brain Anterior Caudate	brain
50	chr15:43805000-43807000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood

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