Variant report

Variant	rs2439850
Chromosome Location	chr15:43784854-43784855
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:43783239..43787260-chr15:43801022..43804758,8	K562	blood:
2	15:43782117-43785993..15:44001645-44015047	GM12878	blood:
3	chr15:43784031..43792065-chr15:43801022..43804774,10	K562	blood:

Variant related genes	Relation type
ENSG00000242866	Chromatin interaction
ENSG00000166763	Chromatin interaction
ENSG00000238494	Chromatin interaction
ENSG00000166963	Chromatin interaction
ENSG00000067369	Chromatin interaction

Extended variants
information (count: 206 )
Associated
traits (count: 16 )

rSNPs within LD-proxies of this variant (count:202)

rs_ID	r²[population]
rs101094	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10518812	0.94[YRI][hapmap]
rs10518820	0.86[CEU][hapmap]
rs1058298	0.84[ASN][1000 genomes]
rs1060939	0.95[JPT][hapmap]
rs1079309	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs1095386	0.86[CEU][hapmap];0.94[YRI][hapmap]
rs11858640	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12323999	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12324584	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12437725	0.86[EUR][1000 genomes]
rs12443102	0.87[CEU][hapmap]
rs12911740	1.00[YRI][hapmap]
rs12912744	0.94[YRI][hapmap]
rs12913977	1.00[YRI][hapmap]
rs12914122	1.00[YRI][hapmap]
rs1549525	0.86[CEU][hapmap]
rs16957680	0.94[YRI][hapmap]
rs16957715	1.00[YRI][hapmap]
rs16957730	1.00[YRI][hapmap]
rs17723479	0.95[YRI][hapmap]
rs17780417	0.95[YRI][hapmap]
rs17780920	0.94[YRI][hapmap]
rs1814538	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1869258	0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2242069	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2243434	0.87[CEU][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2244981	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2245054	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2245176	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2245664	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2245715	0.86[CEU][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2245780	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2245785	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2245790	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2245908	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2249952	0.97[ASN][1000 genomes]
rs2250743	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2250750	0.96[ASN][1000 genomes]
rs2251538	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2251844	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2253268	1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs2253708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2253807	0.96[ASN][1000 genomes]
rs2254321	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2254325	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2255042	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2255051	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2255383	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2255410	0.91[JPT][hapmap]
rs2255440	0.86[CEU][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2255663	0.95[JPT][hapmap]
rs2256764	0.84[AMR][1000 genomes]
rs2260160	0.86[CEU][hapmap]
rs2264049	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2264050	0.99[ASN][1000 genomes]
rs2264239	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2264248	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2264876	0.86[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2278860	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs2412778	0.81[AMR][1000 genomes]
rs2412779	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs2412780	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs2412782	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2439	0.86[CEU][hapmap]
rs2439831	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2439832	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2439833	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2439834	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2439836	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2439841	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2439845	0.96[ASN][1000 genomes]
rs2439846	0.99[ASN][1000 genomes]
rs2439848	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2444028	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2444029	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2444032	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2444037	0.85[ASN][1000 genomes]
rs2444244	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2444247	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2444249	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2444250	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2444251	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2447193	0.87[CEU][hapmap]
rs2447196	0.86[CEU][hapmap]
rs2447208	0.86[CEU][hapmap]
rs2447211	0.87[CEU][hapmap]
rs2467736	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2467737	0.99[ASN][1000 genomes]
rs2467738	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2467739	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2467740	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2467741	0.98[ASN][1000 genomes]
rs2467742	0.99[ASN][1000 genomes]
rs2467743	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2467745	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2467746	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2470121	0.87[CEU][hapmap]
rs2470130	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2470131	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2584694	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2584702	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2584706	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2584725	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2584726	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2584727	0.94[ASN][1000 genomes]
rs2601014	0.87[AMR][1000 genomes]
rs2602141	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2614811	0.87[CEU][hapmap]
rs28461955	0.83[AMR][1000 genomes]
rs28495368	0.86[CEU][hapmap]
rs28628574	0.93[EUR][1000 genomes]
rs28649346	0.98[ASN][1000 genomes]
rs28666488	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28729853	0.83[AMR][1000 genomes]
rs2899082	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs2915788	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2920781	0.86[CEU][hapmap]
rs2924368	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2924369	0.99[ASN][1000 genomes]
rs3097773	0.87[CEU][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes]
rs3101443	0.87[CEU][hapmap]
rs3213990	0.87[CEU][hapmap];0.81[AMR][1000 genomes]
rs3213991	0.83[AMR][1000 genomes]
rs3742969	0.86[CEU][hapmap]
rs3742971	0.86[CEU][hapmap]
rs3809481	1.00[CEU][hapmap]
rs4075674	1.00[CEU][hapmap];0.81[AMR][1000 genomes]
rs45585139	0.81[AMR][1000 genomes]
rs4583210	0.83[AMR][1000 genomes]
rs471229	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs475486	0.90[EUR][1000 genomes]
rs478104	0.86[CEU][hapmap]
rs480108	0.91[JPT][hapmap]
rs483724	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs484029	0.86[CEU][hapmap]
rs486301	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs493377	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs495175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs496584	0.86[CEU][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs506120	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs509306	0.97[ASN][1000 genomes]
rs518288	0.99[ASN][1000 genomes]
rs523156	0.95[JPT][hapmap]
rs524417	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs524527	0.86[CEU][hapmap]
rs526083	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs526450	0.86[CEU][hapmap]
rs527921	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs529611	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs536313	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs537115	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs542898	0.96[ASN][1000 genomes]
rs544122	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs548704	0.94[ASN][1000 genomes]
rs550239	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs558656	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs560191	0.99[ASN][1000 genomes]
rs561863	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56397895	0.82[EUR][1000 genomes]
rs565007	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs572837	0.95[JPT][hapmap]
rs6493085	0.86[CEU][hapmap];0.81[AMR][1000 genomes]
rs6493087	0.87[CEU][hapmap];0.81[JPT][hapmap]
rs6493088	0.81[AMR][1000 genomes]
rs689596	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs689616	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs689647	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs689693	0.87[ASN][1000 genomes]
rs689754	1.00[CEU][hapmap];0.91[CHB][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs689767	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs689781	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs689797	0.95[JPT][hapmap]
rs689816	0.88[ASN][1000 genomes]
rs689826	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs689835	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs689883	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs690002	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs690012	0.96[ASN][1000 genomes]
rs690038	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs690263	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs690276	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs690316	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs690367	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs690436	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs690446	0.99[ASN][1000 genomes]
rs690466	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs690472	0.99[ASN][1000 genomes]
rs690512	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs693510	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs694725	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs694985	1.00[CEU][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7163245	0.81[AMR][1000 genomes]
rs7170489	0.85[CEU][hapmap]
rs7173383	1.00[YRI][hapmap]
rs7173487	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7180812	0.94[YRI][hapmap]
rs7181634	0.94[YRI][hapmap]
rs7497780	0.88[ASN][1000 genomes]
rs8039671	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8042868	0.86[CEU][hapmap]
rs9920763	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534649	chr15:43591116-43851142	Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	esv1846172	chr15:43632138-44116986	Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
3	esv1846701	chr15:43759774-44116986	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
4	nsv437799	chr15:43784000-43989518	Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

mRNA abundance (count:16)

SNP	Gene	Cis/trans	Tissue	Source
rs2439850	CATSPER2	cis	Esophagus Mucosa	GTEx
rs2439850	ADAL	cis	Skin Sun Exposed Lower leg	GTEx
rs2439850	TGM5	cis	Lymphoblastoid	GTEx
rs2439850	ADAL	cis	Adipose Subcutaneous	GTEx
rs2439850	ADAL	cis	Nerve Tibial	GTEx
rs2439850	FLJ35867	cis	multi-tissue	Pritchard
rs2439850	ADAL	cis	Thyroid	GTEx
rs2439850	ELL3	Cis_1M	lymphoblastoid	RTeQTL
rs2439850	ADAL	cis	Artery Aorta	GTEx
rs2439850	ADAL	cis	lung	GTEx
rs2439850	ADAL	cis	Stomach	GTEx
rs2439850	ADAL	cis	Esophagus Muscularis	GTEx
rs2439850	ADAL	cis	Artery Tibial	GTEx
rs2439850	CKMT1A	cis	Esophagus Mucosa	GTEx
rs2439850	ELL3	cis	multi-tissue	Pritchard
rs2439850	ADAL	cis	multi-tissue	Pritchard

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:43784000-43785000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr15:43784000-43785800	Active TSS	Rectal Mucosa Donor 29	rectum
3	chr15:43784000-43786000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr15:43784200-43785000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr15:43784200-43785600	Active TSS	GM12878-XiMat	blood
6	chr15:43784200-43785800	Active TSS	H1 Cell Line	embryonic stem cell
7	chr15:43784200-43786000	Active TSS	H9 Cell Line	embryonic stem cell
8	chr15:43784200-43786000	Active TSS	HUES48 Cell Line	embryonic stem cell
9	chr15:43784200-43786000	Active TSS	Right Atrium	heart
10	chr15:43784400-43785000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
11	chr15:43784400-43785000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
12	chr15:43784400-43785000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr15:43784400-43785000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
14	chr15:43784400-43785000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
15	chr15:43784400-43785600	Active TSS	iPS-15b Cell Line	embryonic stem cell
16	chr15:43784400-43785600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr15:43784400-43785600	Active TSS	Colonic Mucosa	Colon
18	chr15:43784400-43785800	Active TSS	ES-I3 Cell Line	embryonic stem cell
19	chr15:43784400-43785800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr15:43784400-43785800	Active TSS	HUES6 Cell Line	embryonic stem cell
21	chr15:43784400-43785800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr15:43784400-43785800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr15:43784400-43785800	Active TSS	Aorta	Aorta
24	chr15:43784400-43785800	Active TSS	Ovary	ovary
25	chr15:43784400-43785800	Active TSS	A549	lung
26	chr15:43784400-43786000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
27	chr15:43784400-43786000	Active TSS	HUES64 Cell Line	embryonic stem cell
28	chr15:43784400-43786000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr15:43784400-43786000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr15:43784400-43786000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr15:43784400-43786000	Active TSS	Fetal Muscle Trunk	muscle
32	chr15:43784400-43786200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr15:43784600-43785000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
34	chr15:43784600-43785000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
35	chr15:43784600-43785000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
36	chr15:43784600-43785400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
37	chr15:43784600-43785600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr15:43784600-43785600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr15:43784600-43785600	Active TSS	iPS-18 Cell Line	embryonic stem cell
40	chr15:43784600-43785600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr15:43784600-43785600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr15:43784600-43785600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr15:43784600-43785600	Active TSS	Muscle Satellite Cultured Cells	--
44	chr15:43784600-43785600	Active TSS	HSMMtube	muscle
45	chr15:43784600-43785600	Active TSS	NHLF	lung
46	chr15:43784600-43785800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr15:43784600-43785800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr15:43784600-43785800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr15:43784600-43785800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
50	chr15:43784600-43785800	Active TSS	Breast Myoepithelial Primary Cells	Breast

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