Variant report

Variant	rs2253268
Chromosome Location	chr15:43800968-43800969
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr15:43800664-43800994	HepG2	liver:	n/a	n/a
2	POLR2A	chr15:43800840-43800968	MCF10A-Er-Src	breast:	n/a	n/a
3	MAFK	chr15:43800647-43801066	HepG2	liver:	n/a	chr15:43801005-43801019
4	MAFF	chr15:43800702-43801142	K562	blood:	n/a	chr15:43800798-43800816
5	MAFF	chr15:43800648-43801084	HepG2	liver:	n/a	chr15:43800798-43800816
6	MAFK	chr15:43800801-43801123	Hela-S3	cervix:	n/a	chr15:43801005-43801019
7	GATA2	chr15:43800693-43801437	SH-SY5Y	brain:	n/a	n/a
8	MAFK	chr15:43800688-43801127	K562	blood:	n/a	chr15:43801005-43801019
9	MXI1	chr15:43800817-43804506	SK-N-SH	brain:	n/a	chr15:43801252-43801267 chr15:43801254-43801269
10	MAFK	chr15:43800678-43801133	IMR90	lung:	n/a	chr15:43801005-43801019
11	REST	chr15:43800737-43801430	H1-neurons	neurons:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:43662206..43664068-chr15:43799780..43802571,2	K562	blood:
2	15:43792489-43802874..15:44074989-44078735	K562	blood:
3	chr15:43800445..43802853-chr15:44084383..44085884,2	K562	blood:
4	15:43792489-43802874..15:44001645-44015047	GM12878	blood:

Variant related genes	Relation type
MAP1A	TF binding region
ENSG00000268488	Chromatin interaction
ENSG00000242866	Chromatin interaction
ENSG00000140264	Chromatin interaction
ENSG00000238494	Chromatin interaction
ENSG00000137822	Chromatin interaction
ENSG00000140265	Chromatin interaction
ENSG00000166763	Chromatin interaction

Extended variants
information (count: 154 )
Associated
traits (count: 11 )

rSNPs within LD-proxies of this variant (count:150)

rs_ID	r²[population]
rs101094	0.94[ASN][1000 genomes]
rs1060939	1.00[ASW][hapmap];0.91[CEU][hapmap];0.81[CHD][hapmap];0.82[GIH][hapmap];0.91[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.88[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1079309	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1133395	0.80[AMR][1000 genomes]
rs11637572	0.84[CEU][hapmap];0.81[AFR][1000 genomes]
rs11858640	0.94[ASN][1000 genomes]
rs12905772	1.00[CEU][hapmap]
rs1814538	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs1869258	0.86[ASW][hapmap];0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2012467	0.81[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs2242069	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs2244746	0.87[CEU][hapmap];0.82[EUR][1000 genomes]
rs2244981	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2245054	0.94[ASN][1000 genomes]
rs2245176	0.94[ASN][1000 genomes]
rs2245664	0.92[ASN][1000 genomes]
rs2245715	0.81[CHD][hapmap];0.91[JPT][hapmap];0.80[ASN][1000 genomes]
rs2245780	0.94[ASN][1000 genomes]
rs2245785	0.86[ASN][1000 genomes]
rs2245790	0.94[ASN][1000 genomes]
rs2245908	0.92[ASN][1000 genomes]
rs2249952	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2250743	0.92[ASN][1000 genomes]
rs2250750	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2251538	0.94[ASN][1000 genomes]
rs2253708	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[ASN][1000 genomes]
rs2253807	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2254321	0.89[ASN][1000 genomes]
rs2254325	0.88[ASN][1000 genomes]
rs2254927	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2255042	0.80[ASN][1000 genomes]
rs2255383	0.94[ASN][1000 genomes]
rs2255410	0.91[CEU][hapmap];0.91[JPT][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2255440	0.81[CHD][hapmap];0.91[JPT][hapmap];0.80[ASN][1000 genomes]
rs2255663	0.91[CEU][hapmap];0.81[CHD][hapmap];0.82[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.88[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2264049	0.92[ASN][1000 genomes]
rs2264050	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2264239	0.94[ASN][1000 genomes]
rs2264248	0.90[ASN][1000 genomes]
rs2264876	0.95[CHB][hapmap];0.95[CHD][hapmap];0.90[JPT][hapmap];0.94[ASN][1000 genomes]
rs2278857	1.00[ASW][hapmap];0.96[CEU][hapmap];0.91[GIH][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap]
rs2412781	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes]
rs2439831	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2439832	1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2439833	0.85[ASN][1000 genomes]
rs2439836	0.93[ASN][1000 genomes]
rs2439839	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2439841	0.90[ASN][1000 genomes]
rs2439843	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2439845	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2439846	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2439848	0.94[ASN][1000 genomes]
rs2439850	1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs2444028	0.93[ASN][1000 genomes]
rs2444029	0.92[ASN][1000 genomes]
rs2444032	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2444037	0.82[EUR][1000 genomes]
rs2444247	0.93[ASN][1000 genomes]
rs2444249	0.91[ASN][1000 genomes]
rs2444250	1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2444251	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.97[TSI][hapmap];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2467736	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2467737	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2467738	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2467739	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2467740	0.94[ASN][1000 genomes]
rs2467741	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2467742	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2467743	0.94[ASN][1000 genomes]
rs2467745	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2467746	0.82[ASN][1000 genomes]
rs2470130	0.80[ASN][1000 genomes]
rs2470131	0.80[ASN][1000 genomes]
rs2584694	0.88[ASN][1000 genomes]
rs2584700	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs2584701	0.81[EUR][1000 genomes]
rs2584706	0.94[ASN][1000 genomes]
rs2584725	1.00[ASN][1000 genomes]
rs2584726	0.92[ASN][1000 genomes]
rs2584727	0.89[ASN][1000 genomes]
rs2602141	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28649346	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28666488	0.94[ASN][1000 genomes]
rs2924368	0.92[ASN][1000 genomes]
rs2924369	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2927071	0.83[MEX][hapmap]
rs3097773	0.86[JPT][hapmap]
rs3809482	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes]
rs4296223	1.00[CEU][hapmap];0.95[GIH][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs4401024	0.80[AMR][1000 genomes]
rs4547312	0.96[CEU][hapmap];0.91[GIH][hapmap];0.88[MEX][hapmap];0.93[TSI][hapmap]
rs471229	0.93[ASN][1000 genomes]
rs478028	0.91[CEU][hapmap]
rs480108	0.91[CEU][hapmap];0.91[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs483724	0.94[ASN][1000 genomes]
rs493377	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs495175	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[ASN][1000 genomes]
rs496584	0.81[CHD][hapmap];0.91[JPT][hapmap];0.80[ASN][1000 genomes]
rs506120	0.91[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs507178	0.91[CEU][hapmap]
rs509306	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs518288	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs523156	0.87[CEU][hapmap];0.81[CHD][hapmap];0.80[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.83[TSI][hapmap];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs524417	0.94[ASN][1000 genomes]
rs526083	0.87[ASN][1000 genomes]
rs529611	0.86[ASW][hapmap];0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs536313	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.95[MKK][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs537115	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs542898	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs548704	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs550239	0.92[ASN][1000 genomes]
rs558656	0.92[ASN][1000 genomes]
rs560191	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs561863	0.94[ASN][1000 genomes]
rs565007	0.91[ASN][1000 genomes]
rs570933	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs572837	1.00[ASW][hapmap];0.91[CEU][hapmap];0.81[CHD][hapmap];0.82[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs573615	1.00[ASW][hapmap];0.91[CEU][hapmap];0.84[GIH][hapmap];0.87[MEX][hapmap];0.93[MKK][hapmap];0.93[TSI][hapmap]
rs6493083	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.91[MKK][hapmap];0.93[TSI][hapmap]
rs689596	0.92[ASN][1000 genomes]
rs689616	0.94[ASN][1000 genomes]
rs689647	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs689693	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs689754	0.91[CHB][hapmap]
rs689767	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs689781	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];1.00[ASN][1000 genomes]
rs689797	0.91[CEU][hapmap];0.81[CHD][hapmap];0.82[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.88[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs689816	0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs689826	1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs689835	1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs689883	0.82[ASN][1000 genomes]
rs690002	0.85[ASN][1000 genomes]
rs690012	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs690038	0.88[ASN][1000 genomes]
rs690263	0.88[ASN][1000 genomes]
rs690276	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs690316	0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs690367	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs690436	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs690446	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs690466	1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs690472	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs690512	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs693510	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs694725	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.95[MKK][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs694985	0.81[CHD][hapmap];0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs7163288	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];0.91[MEX][hapmap];0.90[TSI][hapmap]
rs7167882	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7497780	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9920879	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[GIH][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534649	chr15:43591116-43851142	Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	esv1846172	chr15:43632138-44116986	Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
3	esv1846701	chr15:43759774-44116986	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
4	nsv437799	chr15:43784000-43989518	Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

mRNA abundance (count:11)

SNP	Gene	Cis/trans	Tissue	Source
rs2253268	AC011330.5	cis	Thyroid	GTEx
rs2253268	ELL3	cis	multi-tissue	Pritchard
rs2253268	CKMT1A	cis	Esophagus Mucosa	GTEx
rs2253268	TGM7	cis	Esophagus Mucosa	GTEx
rs2253268	TGM5	cis	lymphoblastoid	seeQTL
rs2253268	ZSCAN29	cis	Thyroid	GTEx
rs2253268	AC011330.5	cis	Artery Tibial	GTEx
rs2253268	ADAL	cis	Nerve Tibial	GTEx
rs2253268	TGM5	cis	multi-tissue	Pritchard
rs2253268	STRCP1	cis	Esophagus Muscularis	GTEx
rs2253268	ZSCAN29	cis	multi-tissue	Pritchard

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:43786000-43801800	Weak transcription	Primary T cells from cord blood	blood
2	chr15:43786200-43801200	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr15:43786200-43801200	Weak transcription	Ovary	ovary
4	chr15:43786400-43801000	Weak transcription	Dnd41	blood
5	chr15:43789400-43801200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr15:43794200-43802000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr15:43795400-43801800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr15:43796600-43802000	Weak transcription	Aorta	Aorta
9	chr15:43796800-43802000	Weak transcription	Fetal Kidney	kidney
10	chr15:43798400-43801000	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr15:43798400-43801200	Weak transcription	Fetal Thymus	thymus
12	chr15:43798600-43801600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr15:43798800-43801000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr15:43798800-43801400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr15:43799000-43801000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr15:43799000-43801000	Weak transcription	Fetal Lung	lung
17	chr15:43800200-43801400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr15:43800400-43801000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr15:43800400-43801400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr15:43800600-43801000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr15:43800600-43801000	Enhancers	iPS-20b Cell Line	embryonic stem cell
22	chr15:43800600-43801000	Enhancers	Muscle Satellite Cultured Cells	--
23	chr15:43800600-43801000	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr15:43800600-43801000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr15:43800600-43801000	Enhancers	Brain Anterior Caudate	brain
26	chr15:43800600-43801000	Enhancers	Brain Germinal Matrix	brain
27	chr15:43800600-43801000	Enhancers	Fetal Brain Male	brain
28	chr15:43800600-43801000	Enhancers	Fetal Brain Female	brain
29	chr15:43800600-43801000	Enhancers	K562	blood
30	chr15:43800600-43801000	Enhancers	NHDF-Ad	bronchial
31	chr15:43800600-43801200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr15:43800600-43801400	Enhancers	Brain Angular Gyrus	brain
33	chr15:43800600-43801400	Enhancers	Right Atrium	heart
34	chr15:43800600-43801400	Enhancers	HepG2	liver
35	chr15:43800600-43801600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr15:43800600-43801600	Enhancers	Colon Smooth Muscle	Colon
37	chr15:43800600-43801600	Enhancers	Skeletal Muscle Female	skeletal muscle
38	chr15:43800600-43801800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr15:43800600-43801800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr15:43800600-43801800	Enhancers	Fetal Muscle Leg	muscle
41	chr15:43800600-43801800	Enhancers	Rectal Smooth Muscle	rectum
42	chr15:43800600-43802000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr15:43800600-43802000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr15:43800600-43802000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
45	chr15:43800600-43802000	Enhancers	Fetal Heart	heart
46	chr15:43800600-43802000	Enhancers	Fetal Stomach	stomach
47	chr15:43800600-43802000	Enhancers	HSMM	muscle
48	chr15:43800600-43802000	Enhancers	Osteobl	bone
49	chr15:43800600-43802200	Enhancers	Breast Myoepithelial Primary Cells	Breast
50	chr15:43800600-43802200	Enhancers	Left Ventricle	heart

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