The 2.0 version of rSNPBase

Variant report

Variant rs2278856
Chromosome Location chr15:43631356-43631357
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:43623200-43633600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:43623200-43651000 Weak transcription Placenta Amnion Placenta Amnion
3 chr15:43623200-43651600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr15:43623200-43651600 Weak transcription Pancreas Pancrea
5 chr15:43623400-43632800 Weak transcription Aorta Aorta
6 chr15:43623400-43639600 Weak transcription Fetal Kidney kidney
7 chr15:43623400-43641200 Weak transcription Colonic Mucosa Colon
8 chr15:43623400-43644000 Weak transcription Fetal Thymus thymus
9 chr15:43623400-43649200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr15:43623400-43650400 Weak transcription Fetal Brain Male brain
11 chr15:43623400-43651000 Weak transcription Gastric stomach
12 chr15:43623400-43651000 Weak transcription Small Intestine intestine
13 chr15:43623400-43653200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr15:43623600-43632200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:43623600-43637800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr15:43623600-43638000 Weak transcription Fetal Brain Female brain
17 chr15:43623600-43642600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr15:43623600-43642600 Weak transcription Rectal Smooth Muscle rectum
19 chr15:43623600-43643200 Weak transcription Primary monocytes fromperipheralblood blood
20 chr15:43623600-43644000 Weak transcription Brain Germinal Matrix brain
21 chr15:43623600-43644200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr15:43623600-43646000 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr15:43623600-43646200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr15:43623600-43646600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr15:43623600-43646800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr15:43623600-43650400 Weak transcription NH-A brain
27 chr15:43623600-43650800 Weak transcription HMEC breast
28 chr15:43623600-43650800 Weak transcription NHLF lung
29 chr15:43623600-43651000 Weak transcription H9 Cell Line embryonic stem cell
30 chr15:43623600-43651000 Weak transcription A549 lung
31 chr15:43623600-43653000 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr15:43623800-43633800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr15:43623800-43638000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr15:43623800-43638200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr15:43623800-43641800 Weak transcription Psoas Muscle Psoas
36 chr15:43623800-43645800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr15:43623800-43646000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr15:43624000-43633400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr15:43624000-43641200 Weak transcription NHEK skin
40 chr15:43624000-43647000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr15:43624600-43644600 Weak transcription Fetal Heart heart
42 chr15:43625600-43633200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr15:43625600-43647200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr15:43625800-43636400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr15:43626000-43633200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr15:43626000-43633200 Strong transcription Dnd41 blood
47 chr15:43626200-43633400 Strong transcription Left Ventricle heart
48 chr15:43627000-43633600 Strong transcription Brain Inferior Temporal Lobe brain
49 chr15:43627200-43633600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr15:43627200-43633600 Strong transcription Liver Liver

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Last update: Aug 31, 2015