The 2.0 version of rSNPBase

Variant report

Variant rs11858152
Chromosome Location chr15:43634196-43634197
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:43623200-43651000 Weak transcription Placenta Amnion Placenta Amnion
2 chr15:43623200-43651600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr15:43623200-43651600 Weak transcription Pancreas Pancrea
4 chr15:43623400-43639600 Weak transcription Fetal Kidney kidney
5 chr15:43623400-43641200 Weak transcription Colonic Mucosa Colon
6 chr15:43623400-43644000 Weak transcription Fetal Thymus thymus
7 chr15:43623400-43649200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:43623400-43650400 Weak transcription Fetal Brain Male brain
9 chr15:43623400-43651000 Weak transcription Gastric stomach
10 chr15:43623400-43651000 Weak transcription Small Intestine intestine
11 chr15:43623400-43653200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr15:43623600-43637800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr15:43623600-43638000 Weak transcription Fetal Brain Female brain
14 chr15:43623600-43642600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr15:43623600-43642600 Weak transcription Rectal Smooth Muscle rectum
16 chr15:43623600-43643200 Weak transcription Primary monocytes fromperipheralblood blood
17 chr15:43623600-43644000 Weak transcription Brain Germinal Matrix brain
18 chr15:43623600-43644200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr15:43623600-43646000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr15:43623600-43646200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr15:43623600-43646600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr15:43623600-43646800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr15:43623600-43650400 Weak transcription NH-A brain
24 chr15:43623600-43650800 Weak transcription HMEC breast
25 chr15:43623600-43650800 Weak transcription NHLF lung
26 chr15:43623600-43651000 Weak transcription H9 Cell Line embryonic stem cell
27 chr15:43623600-43651000 Weak transcription A549 lung
28 chr15:43623600-43653000 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr15:43623800-43638000 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr15:43623800-43638200 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr15:43623800-43641800 Weak transcription Psoas Muscle Psoas
32 chr15:43623800-43645800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr15:43623800-43646000 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr15:43624000-43641200 Weak transcription NHEK skin
35 chr15:43624000-43647000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr15:43624600-43644600 Weak transcription Fetal Heart heart
37 chr15:43625600-43647200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr15:43625800-43636400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr15:43627200-43636400 Strong transcription Skeletal Muscle Male skeletal muscle
40 chr15:43627600-43635200 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr15:43628000-43634200 Strong transcription Fetal Intestine Large intestine
42 chr15:43628200-43635800 Strong transcription Fetal Muscle Trunk muscle
43 chr15:43628400-43650400 Weak transcription Primary B cells from cord blood blood
44 chr15:43628600-43637800 Weak transcription Primary hematopoietic stem cells blood
45 chr15:43628600-43638000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:43629000-43646000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr15:43629200-43651000 Weak transcription NHDF-Ad bronchial
48 chr15:43629600-43634200 Strong transcription Skeletal Muscle Female skeletal muscle
49 chr15:43629800-43637800 Weak transcription Muscle Satellite Cultured Cells --
50 chr15:43630000-43634600 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015