The 2.0 version of rSNPBase

Variant report

Variant rs1145235
Chromosome Location chr2:190741693-190741694
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190658200-190743800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr2:190659800-190743600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:190664800-190741800 Weak transcription Brain Angular Gyrus brain
4 chr2:190669400-190743800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr2:190681000-190743000 Weak transcription Brain Germinal Matrix brain
6 chr2:190684000-190743600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:190685400-190741800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:190691000-190744200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr2:190701200-190743200 Weak transcription Fetal Brain Male brain
10 chr2:190701400-190744000 Weak transcription Fetal Brain Female brain
11 chr2:190701600-190743200 Weak transcription Stomach Smooth Muscle stomach
12 chr2:190701600-190744800 Weak transcription Rectal Smooth Muscle rectum
13 chr2:190701800-190745200 Weak transcription Fetal Kidney kidney
14 chr2:190702400-190745600 Weak transcription Colon Smooth Muscle Colon
15 chr2:190706800-190742800 Weak transcription Fetal Heart heart
16 chr2:190707600-190746000 Weak transcription Left Ventricle heart
17 chr2:190708400-190743400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr2:190708800-190744400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr2:190709600-190744000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:190710600-190741800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr2:190713200-190743400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:190713200-190743800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr2:190713200-190745600 Weak transcription Pancreas Pancrea
24 chr2:190713800-190743800 Weak transcription Fetal Intestine Large intestine
25 chr2:190713800-190744400 Weak transcription Gastric stomach
26 chr2:190713800-190744800 Weak transcription K562 blood
27 chr2:190714600-190743800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr2:190714600-190744000 Weak transcription Fetal Stomach stomach
29 chr2:190714600-190744400 Weak transcription Psoas Muscle Psoas
30 chr2:190714800-190745200 Weak transcription NHEK skin
31 chr2:190715000-190741800 Weak transcription Aorta Aorta
32 chr2:190715600-190744800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr2:190716000-190743400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:190716600-190743400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr2:190716600-190744200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr2:190716800-190744200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr2:190718600-190743000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr2:190718600-190745800 Weak transcription Fetal Intestine Small intestine
39 chr2:190719800-190743600 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:190719800-190743800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:190720000-190741800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:190720000-190743400 Weak transcription Duodenum Mucosa Duodenum
43 chr2:190720000-190744000 Weak transcription H1 Cell Line embryonic stem cell
44 chr2:190720000-190744000 Weak transcription NH-A brain
45 chr2:190722200-190745600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr2:190725200-190746000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr2:190725400-190742800 Weak transcription Placenta Amnion Placenta Amnion
48 chr2:190729000-190745200 Weak transcription HUVEC blood vessel
49 chr2:190729200-190743800 Weak transcription Fetal Thymus thymus
50 chr2:190729600-190743200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015