The 2.0 version of rSNPBase

Variant report

Variant rs1225082
Chromosome Location chr2:190590349-190590350
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540800-190592600 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
4 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
5 chr2:190550800-190591400 Weak transcription Primary T cells fromperipheralblood blood
6 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:190550800-190626800 Weak transcription Right Ventricle heart
8 chr2:190551200-190603400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr2:190551200-190617000 Weak transcription HSMM muscle
10 chr2:190555600-190593000 Weak transcription Fetal Lung lung
11 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
12 chr2:190563400-190607800 Weak transcription Primary T cells from cord blood blood
13 chr2:190563600-190593200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr2:190563600-190608400 Weak transcription Brain Anterior Caudate brain
15 chr2:190563600-190611800 Weak transcription Brain Substantia Nigra brain
16 chr2:190563600-190612600 Weak transcription Brain Inferior Temporal Lobe brain
17 chr2:190564000-190593200 Weak transcription Liver Liver
18 chr2:190568200-190594200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:190568200-190611600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr2:190571600-190606800 Weak transcription Primary B cells from cord blood blood
21 chr2:190571600-190607800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr2:190571600-190608400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:190571600-190612400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:190571800-190608600 Weak transcription Duodenum Mucosa Duodenum
25 chr2:190572000-190608400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr2:190573000-190606600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr2:190573000-190611000 Weak transcription Stomach Smooth Muscle stomach
28 chr2:190575000-190615800 Weak transcription Fetal Kidney kidney
29 chr2:190576800-190592600 Weak transcription Adipose Nuclei Adipose
30 chr2:190576800-190593000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:190576800-190608200 Weak transcription Primary hematopoietic stem cells blood
32 chr2:190576800-190609000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:190576800-190627000 Weak transcription Pancreas Pancrea
34 chr2:190577000-190604400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr2:190577000-190611600 Weak transcription Ovary ovary
36 chr2:190577000-190622600 Weak transcription Aorta Aorta
37 chr2:190577200-190593200 Weak transcription Left Ventricle heart
38 chr2:190577200-190611800 Weak transcription Fetal Stomach stomach
39 chr2:190580000-190611000 Weak transcription Fetal Intestine Large intestine
40 chr2:190580000-190611600 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr2:190583000-190626800 Weak transcription Psoas Muscle Psoas
42 chr2:190585200-190608200 Weak transcription Primary monocytes fromperipheralblood blood
43 chr2:190585400-190606600 Weak transcription Fetal Muscle Trunk muscle
44 chr2:190588600-190606800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:190588600-190608400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:190589400-190626600 Weak transcription HUVEC blood vessel
47 chr2:190589600-190611600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015