Variant report

Variant	rs11511171
Chromosome Location	chr10:23171862-23171863
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10128359	1.00[ASN][1000 genomes]
rs11013245	1.00[ASN][1000 genomes]
rs11013246	1.00[ASN][1000 genomes]
rs11013247	1.00[ASN][1000 genomes]
rs11013248	1.00[ASN][1000 genomes]
rs11013250	1.00[ASN][1000 genomes]
rs11013251	1.00[ASN][1000 genomes]
rs11013252	1.00[ASN][1000 genomes]
rs11013253	1.00[ASN][1000 genomes]
rs11013255	1.00[ASN][1000 genomes]
rs11013261	1.00[ASN][1000 genomes]
rs11013262	1.00[ASN][1000 genomes]
rs11013263	1.00[ASN][1000 genomes]
rs11013264	1.00[ASN][1000 genomes]
rs12243596	1.00[ASN][1000 genomes]
rs12246105	1.00[ASN][1000 genomes]
rs12249666	1.00[ASN][1000 genomes]
rs12257453	1.00[ASN][1000 genomes]
rs12257887	1.00[ASN][1000 genomes]
rs12259839	1.00[ASN][1000 genomes]
rs12261088	1.00[ASN][1000 genomes]
rs12261456	1.00[ASN][1000 genomes]
rs12264038	1.00[ASN][1000 genomes]
rs12269590	1.00[ASN][1000 genomes]
rs12763092	1.00[ASN][1000 genomes]
rs12763296	1.00[ASN][1000 genomes]
rs12773226	1.00[ASN][1000 genomes]
rs12773873	1.00[ASN][1000 genomes]
rs12784450	1.00[ASN][1000 genomes]
rs34243414	1.00[ASN][1000 genomes]
rs34853435	1.00[ASN][1000 genomes]
rs34934641	1.00[ASN][1000 genomes]
rs35627133	1.00[ASN][1000 genomes]
rs35840125	1.00[ASN][1000 genomes]
rs36053598	1.00[ASN][1000 genomes]
rs59709734	1.00[ASN][1000 genomes]
rs66468760	1.00[ASN][1000 genomes]
rs66482823	1.00[ASN][1000 genomes]
rs66815792	1.00[ASN][1000 genomes]
rs67480460	1.00[ASN][1000 genomes]
rs67750769	1.00[ASN][1000 genomes]
rs67798485	1.00[ASN][1000 genomes]
rs7089828	1.00[ASN][1000 genomes]
rs72800633	1.00[ASN][1000 genomes]
rs72812467	1.00[ASN][1000 genomes]
rs7358041	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv894966	chr10:23090535-23202522	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23170000-23174600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:23170000-23174600	Weak transcription	Pancreas	Pancrea
3	chr10:23170200-23174600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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