Variant report

Variant	rs12773873
Chromosome Location	chr10:23308670-23308671
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:23303236..23310250-chr10:23341340..23346193,13	K562	blood:
2	chr10:23302995..23309769-chr10:23341340..23346193,8	K562	blood:
3	chr10:23108692..23110534-chr10:23308268..23309848,2	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10128359	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013245	1.00[ASN][1000 genomes]
rs11013246	1.00[ASN][1000 genomes]
rs11013247	1.00[ASN][1000 genomes]
rs11013248	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013249	0.98[EUR][1000 genomes]
rs11013250	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013251	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013252	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013253	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013255	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013261	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013262	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013263	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013264	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11511171	1.00[ASN][1000 genomes]
rs12243596	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12246105	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12249666	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12257453	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12257887	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12259839	1.00[ASN][1000 genomes]
rs12261088	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12261456	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12264038	1.00[ASN][1000 genomes]
rs12269590	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12763092	1.00[ASN][1000 genomes]
rs12763296	1.00[ASN][1000 genomes]
rs12773226	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12784450	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34243414	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34853435	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34934641	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35627133	1.00[ASN][1000 genomes]
rs35840125	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36053598	1.00[ASN][1000 genomes]
rs59709734	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66468760	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66482823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66815792	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67480460	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67750769	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67798485	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7089828	1.00[ASN][1000 genomes]
rs72800633	1.00[ASN][1000 genomes]
rs72812467	1.00[ASN][1000 genomes]
rs7358041	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23301400-23311200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links