The 2.0 version of rSNPBase

Variant report

Variant rs11588089
Chromosome Location chr1:59206042-59206043
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59198200-59206200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr1:59198800-59207200 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:59204000-59206200 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:59204800-59206400 Enhancers HUVEC blood vessel
5 chr1:59205200-59211200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:59205400-59206200 Enhancers Fetal Kidney kidney
7 chr1:59205600-59210800 Weak transcription HMEC breast
8 chr1:59205800-59206200 Enhancers Colon Smooth Muscle Colon
9 chr1:59205800-59206200 Enhancers Fetal Intestine Small intestine
10 chr1:59205800-59206400 Enhancers Skeletal Muscle Male skeletal muscle
11 chr1:59205800-59206400 Enhancers Stomach Smooth Muscle stomach
12 chr1:59205800-59206400 Enhancers NHDF-Ad bronchial
13 chr1:59205800-59206600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:59205800-59206800 Enhancers HepG2 liver
15 chr1:59206000-59206400 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr1:59206000-59206400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:59206000-59207800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:59206000-59211200 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015