The 2.0 version of rSNPBase

Variant report

Variant rs11588922
Chromosome Location chr1:184481399-184481400
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184455200-184482000 Weak transcription Esophagus oesophagus
2 chr1:184456400-184502200 Weak transcription Fetal Muscle Trunk muscle
3 chr1:184459600-184483000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:184461000-184482600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:184461600-184502800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:184468000-184482800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:184473600-184489400 Weak transcription H1 Cell Line embryonic stem cell
8 chr1:184473800-184483000 Weak transcription Colonic Mucosa Colon
9 chr1:184474200-184482000 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr1:184474200-184488600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:184474400-184482600 Weak transcription Pancreas Pancrea
12 chr1:184474400-184483200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:184474400-184488000 Weak transcription Right Ventricle heart
14 chr1:184474400-184505400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:184476000-184482400 Weak transcription NHEK skin
16 chr1:184476600-184482000 Weak transcription Right Atrium heart
17 chr1:184476800-184482800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:184476800-184489800 Weak transcription Fetal Stomach stomach
19 chr1:184477000-184482600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:184477000-184483000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:184477200-184483000 Weak transcription A549 lung
22 chr1:184477200-184487600 Weak transcription Fetal Brain Female brain
23 chr1:184477200-184488000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:184477400-184482600 Weak transcription NHDF-Ad bronchial
25 chr1:184477400-184483000 Weak transcription NHLF lung
26 chr1:184477400-184487200 Weak transcription Fetal Brain Male brain
27 chr1:184477400-184487800 Weak transcription Colon Smooth Muscle Colon
28 chr1:184477400-184488600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:184477400-184489000 Weak transcription Stomach Smooth Muscle stomach
30 chr1:184477400-184494800 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:184477400-184502200 Weak transcription Primary hematopoietic stem cells blood
32 chr1:184477800-184489200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:184477800-184491800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:184478000-184482600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:184478000-184493200 Weak transcription HSMM muscle
36 chr1:184478200-184481400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:184478400-184482000 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr1:184478400-184482600 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:184478400-184486600 Weak transcription Adipose Nuclei Adipose
40 chr1:184478400-184486600 Weak transcription Fetal Lung lung
41 chr1:184478400-184505200 Weak transcription Fetal Intestine Small intestine
42 chr1:184478600-184482200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:184478600-184486000 Weak transcription Fetal Intestine Large intestine
44 chr1:184478600-184488600 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr1:184478600-184501200 Weak transcription Fetal Heart heart
46 chr1:184478800-184483000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:184478800-184483400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:184478800-184487800 Weak transcription Duodenum Mucosa Duodenum
49 chr1:184478800-184502200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:184479000-184482000 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015