Variant report

Variant rs2180077
Chromosome Location chr1:184461104-184461105
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184450200-184463200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:184451400-184463600 Weak transcription Brain Cingulate Gyrus brain
3 chr1:184454000-184461400 Weak transcription Gastric stomach
4 chr1:184454200-184461800 Weak transcription Fetal Brain Male brain
5 chr1:184455200-184482000 Weak transcription Esophagus oesophagus
6 chr1:184455800-184466200 Weak transcription Brain Inferior Temporal Lobe brain
7 chr1:184456200-184462800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:184456200-184464000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:184456400-184461400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:184456400-184465200 Weak transcription Fetal Brain Female brain
11 chr1:184456400-184502200 Weak transcription Fetal Muscle Trunk muscle
12 chr1:184456600-184472800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:184457200-184466000 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:184457400-184468200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:184458400-184463800 Enhancers Fetal Intestine Small intestine
16 chr1:184458600-184461600 Enhancers Small Intestine intestine
17 chr1:184458600-184463800 Enhancers Fetal Intestine Large intestine
18 chr1:184458800-184463600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:184459000-184467000 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr1:184459200-184461200 Enhancers Rectal Mucosa Donor 31 rectum
21 chr1:184459200-184461200 Enhancers Stomach Mucosa stomach
22 chr1:184459200-184462000 Enhancers Colon Smooth Muscle Colon
23 chr1:184459600-184461400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:184459600-184461400 Weak transcription Pancreas Pancrea
25 chr1:184459600-184462800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:184459600-184463000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:184459600-184463000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr1:184459600-184463400 Weak transcription Brain Anterior Caudate brain
29 chr1:184459600-184463600 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:184459600-184465200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:184459600-184466200 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:184459600-184483000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:184459800-184463200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:184460000-184461200 Enhancers HMEC breast
35 chr1:184460000-184465200 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr1:184460200-184461200 Active TSS A549 lung
37 chr1:184460200-184461600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:184460200-184461600 Enhancers Primary hematopoietic stem cells blood
39 chr1:184460200-184461600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:184460200-184461600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:184460200-184461600 Enhancers NH-A brain
42 chr1:184460200-184462000 Enhancers Left Ventricle heart
43 chr1:184460200-184462000 Enhancers Psoas Muscle Psoas
44 chr1:184460400-184461200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:184460400-184461400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:184460400-184461400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:184460400-184461400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:184460400-184461400 Flanking Active TSS Muscle Satellite Cultured Cells --
49 chr1:184460400-184461400 Enhancers HUVEC blood vessel
50 chr1:184460400-184461600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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