The 2.0 version of rSNPBase

Variant report

Variant rs55729410
Chromosome Location chr1:184453084-184453085
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184429000-184454800 Weak transcription Aorta Aorta
2 chr1:184439200-184453600 Weak transcription Fetal Brain Female brain
3 chr1:184444200-184453400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:184444600-184460400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:184447000-184454600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:184447400-184453600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:184447400-184457600 Enhancers Fetal Intestine Small intestine
8 chr1:184447800-184457000 Enhancers Fetal Intestine Large intestine
9 chr1:184448800-184456400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:184449000-184456400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:184449200-184460600 Enhancers Skeletal Muscle Female skeletal muscle
12 chr1:184449400-184455200 Weak transcription Primary hematopoietic stem cells blood
13 chr1:184449600-184456600 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:184449800-184454000 Enhancers Left Ventricle heart
15 chr1:184449800-184455200 Enhancers Fetal Heart heart
16 chr1:184449800-184457000 Enhancers Colon Smooth Muscle Colon
17 chr1:184449800-184457200 Enhancers Adipose Nuclei Adipose
18 chr1:184449800-184457200 Enhancers Fetal Muscle Leg muscle
19 chr1:184449800-184457400 Enhancers Ovary ovary
20 chr1:184449800-184457600 Enhancers Right Atrium heart
21 chr1:184449800-184459800 Enhancers Psoas Muscle Psoas
22 chr1:184450000-184455000 Weak transcription Spleen Spleen
23 chr1:184450000-184456000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:184450000-184456000 Enhancers Fetal Stomach stomach
25 chr1:184450200-184453600 Weak transcription Gastric stomach
26 chr1:184450200-184463200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:184450400-184457600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:184450800-184454000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:184450800-184454800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:184450800-184455800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:184450800-184456000 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr1:184450800-184456000 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:184450800-184456000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr1:184450800-184457000 Enhancers Rectal Mucosa Donor 31 rectum
35 chr1:184451000-184456200 Enhancers Pancreas Pancrea
36 chr1:184451200-184454000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:184451200-184454800 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr1:184451200-184455400 Enhancers HSMM muscle
39 chr1:184451400-184453600 Weak transcription NHEK skin
40 chr1:184451400-184454800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:184451400-184455800 Enhancers HSMMtube muscle
42 chr1:184451400-184457000 Enhancers Stomach Mucosa stomach
43 chr1:184451400-184463600 Weak transcription Brain Cingulate Gyrus brain
44 chr1:184451600-184455000 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:184451600-184455000 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr1:184451600-184455600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:184451600-184456400 Enhancers Rectal Smooth Muscle rectum
48 chr1:184451600-184459200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:184451800-184456000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:184451800-184456600 Enhancers Breast Myoepithelial Primary Cells Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015