The 2.0 version of rSNPBase

Variant report

Variant rs6666704
Chromosome Location chr1:184449867-184449868
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184429000-184454800 Weak transcription Aorta Aorta
2 chr1:184430600-184450000 Weak transcription Fetal Stomach stomach
3 chr1:184438000-184450600 Weak transcription Stomach Smooth Muscle stomach
4 chr1:184439200-184453600 Weak transcription Fetal Brain Female brain
5 chr1:184441000-184452000 Weak transcription Colonic Mucosa Colon
6 chr1:184444200-184450400 Weak transcription Pancreas Pancrea
7 chr1:184444200-184453400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:184444400-184450400 Weak transcription NHDF-Ad bronchial
9 chr1:184444400-184452000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:184444600-184452600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:184444600-184460400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:184444800-184450000 Weak transcription Fetal Lung lung
13 chr1:184444800-184450400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:184444800-184451600 Weak transcription Rectal Smooth Muscle rectum
15 chr1:184444800-184452200 Weak transcription Fetal Kidney kidney
16 chr1:184445800-184450200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:184446400-184450600 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr1:184446400-184452000 Weak transcription Osteobl bone
19 chr1:184446600-184450000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:184446600-184450000 Weak transcription Lung lung
21 chr1:184446600-184450000 Weak transcription NHEK skin
22 chr1:184446600-184450000 Weak transcription NHLF lung
23 chr1:184446800-184450800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:184446800-184451800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:184446800-184453000 Weak transcription Fetal Muscle Trunk muscle
26 chr1:184447000-184454600 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:184447200-184452200 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr1:184447400-184453600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:184447400-184457600 Enhancers Fetal Intestine Small intestine
30 chr1:184447600-184450200 Enhancers Rectal Mucosa Donor 31 rectum
31 chr1:184447800-184451200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:184447800-184457000 Enhancers Fetal Intestine Large intestine
33 chr1:184448200-184452200 Weak transcription HMEC breast
34 chr1:184448400-184450400 Enhancers Stomach Mucosa stomach
35 chr1:184448400-184451000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:184448400-184452200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:184448800-184450600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
38 chr1:184448800-184451000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr1:184448800-184451800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:184448800-184456400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:184449000-184450800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:184449000-184450800 Enhancers Placenta Amnion Placenta Amnion
43 chr1:184449000-184451200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:184449000-184451800 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr1:184449000-184452200 Weak transcription Brain Hippocampus Middle brain
46 chr1:184449000-184453000 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr1:184449000-184456400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:184449200-184450000 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr1:184449200-184450800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr1:184449200-184451600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015