Variant report

Variant	rs11597275
Chromosome Location	chr10:55771001-55771002
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10763071	1.00[CHB][hapmap]
rs10825240	1.00[CHB][hapmap]
rs11004028	0.81[CEU][hapmap]
rs11593843	0.82[CEU][hapmap]
rs11594112	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11594638	0.82[CEU][hapmap]
rs11598849	1.00[CEU][hapmap]
rs11599859	0.81[CEU][hapmap]
rs12242499	0.81[CEU][hapmap]
rs12250681	0.82[CEU][hapmap]
rs12255282	0.80[CEU][hapmap]
rs12257494	0.81[CEU][hapmap]
rs17636887	0.95[CEU][hapmap]
rs17643506	0.82[CEU][hapmap]
rs17643564	0.81[CEU][hapmap]
rs1911379	0.82[CEU][hapmap]
rs1911402	0.81[CEU][hapmap]
rs2610873	0.82[CEU][hapmap]
rs2660150	0.82[CEU][hapmap]
rs2660151	0.82[CEU][hapmap]
rs2660152	0.81[CEU][hapmap]
rs2660154	0.81[CEU][hapmap]
rs2660159	0.82[CEU][hapmap]
rs3812657	0.81[CEU][hapmap]
rs4935499	1.00[CHB][hapmap]
rs7074447	1.00[CHB][hapmap]
rs7898152	0.81[CEU][hapmap]
rs7902776	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949692	chr10:55502542-55893206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv869303	chr10:55714219-55857931	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:55771000-55771400	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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