Variant report

Variant	rs11601057
Chromosome Location	chr11:46148147-46148148
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:46145897..46150306-chr11:46257963..46261369,4	K562	blood:
2	chr11:46119177..46122741-chr11:46145654..46148976,3	K562	blood:
3	chr11:46148134..46150405-chr11:46256604..46259294,2	MCF-7	breast:
4	chr11:46146722..46148878-chr11:46154791..46157299,2	K562	blood:
5	chr11:46147849..46150697-chr11:46169653..46172751,3	MCF-7	breast:
6	chr11:46139740..46148810-chr11:46253862..46264263,27	K562	blood:
7	chr11:46146370..46148559-chr11:46258824..46261475,2	MCF-7	breast:
8	chr11:46146652..46148906-chr11:46367126..46369199,2	K562	blood:
9	chr11:46147732..46150702-chr11:46170620..46172789,2	MCF-7	breast:
10	chr11:46147928..46150001-chr11:46315625..46317759,2	K562	blood:
11	chr11:45918756..45920830-chr11:46147616..46150404,2	K562	blood:
12	chr11:46146685..46149100-chr11:46265577..46268060,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000157613	Chromatin interaction
ENSG00000149091	Chromatin interaction
ENSG00000254639	Chromatin interaction

rs_ID	r²[population]
rs10769187	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11038775	0.93[EUR][1000 genomes]
rs11038780	0.87[EUR][1000 genomes]
rs11038781	0.91[EUR][1000 genomes]
rs12287430	0.91[EUR][1000 genomes]
rs1970848	0.94[EUR][1000 genomes]
rs1976182	0.80[AFR][1000 genomes]
rs4756055	0.82[AFR][1000 genomes]
rs7112677	0.81[EUR][1000 genomes]
rs7118159	0.94[EUR][1000 genomes]
rs7120013	0.96[EUR][1000 genomes]
rs7924340	0.91[EUR][1000 genomes]
rs7950474	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs950105	0.80[AFR][1000 genomes]

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46141800-46148800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr11:46144200-46148400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr11:46144200-46148400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr11:46144200-46148400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr11:46144200-46148800	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr11:46144400-46148400	Weak transcription	Primary T cells from cord blood	blood
7	chr11:46144400-46148400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr11:46144400-46148400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr11:46144400-46148400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr11:46144400-46148400	Weak transcription	GM12878-XiMat	blood
11	chr11:46144400-46148600	Weak transcription	NHLF	lung
12	chr11:46144400-46148800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr11:46144400-46148800	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr11:46144400-46148800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr11:46144400-46152000	Weak transcription	Primary B cells from peripheral blood	blood
16	chr11:46144800-46148200	Weak transcription	Primary monocytes fromperipheralblood	blood
17	chr11:46144800-46148200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr11:46144800-46148400	Weak transcription	Primary T helper cells PMA-I stimulated	--
19	chr11:46144800-46148400	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr11:46144800-46148400	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr11:46144800-46148600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr11:46144800-46148600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr11:46144800-46148800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr11:46144800-46148800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr11:46144800-46148800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr11:46144800-46148800	Weak transcription	Small Intestine	intestine
27	chr11:46144800-46148800	Weak transcription	Thymus	Thymus
28	chr11:46145000-46148600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr11:46145000-46148600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr11:46145000-46148600	Weak transcription	Adipose Nuclei	Adipose
31	chr11:46145000-46148600	Weak transcription	NHEK	skin
32	chr11:46145000-46148800	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr11:46145200-46148200	Weak transcription	Hela-S3	cervix
34	chr11:46145200-46148400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr11:46145200-46148400	Weak transcription	HepG2	liver
36	chr11:46145200-46148600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr11:46145200-46148600	Weak transcription	HMEC	breast
38	chr11:46145200-46148600	Weak transcription	NHDF-Ad	bronchial
39	chr11:46145200-46148800	Weak transcription	Osteobl	bone
40	chr11:46145400-46148200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr11:46145400-46148400	Weak transcription	A549	lung
42	chr11:46146800-46148800	Weak transcription	Duodenum Mucosa	Duodenum
43	chr11:46147600-46148600	Enhancers	Primary neutrophils fromperipheralblood	blood
44	chr11:46148000-46148200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
45	chr11:46148000-46148600	Enhancers	K562	blood

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