Variant report

Variant	rs11612479
Chromosome Location	chr12:124155526-124155527
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RFX5	chr12:124155458-124155790	HepG2	liver:	n/a	chr12:124155653-124155668 chr12:124155653-124155668 chr12:124155653-124155668 chr12:124155652-124155669
2	ZC3H11A	chr12:124155332-124155698	K562	blood:	n/a	n/a
3	MAX	chr12:124155324-124156858	ECC-1	luminal epithelium:	n/a	chr12:124156248-124156258 chr12:124155654-124155663 chr12:124155574-124155584 chr12:124156185-124156195
4	HEY1	chr12:124155407-124155601	K562	blood:	n/a	n/a
5	POLR2A	chr12:124155427-124155806	A549	lung:	n/a	n/a
6	CEBPB	chr12:124155414-124155714	HepG2	liver:	n/a	n/a
7	SIN3AK20	chr12:124155369-124155892	SK-N-SH	brain:	n/a	n/a
8	POLR2A	chr12:124155366-124155886	U87	brain:	n/a	n/a
9	TAF1	chr12:124155296-124155834	GM12878	blood:	n/a	n/a
10	YY1	chr12:124155278-124156037	SK-N-SH_RA	brain:	n/a	chr12:124155683-124155691 chr12:124155690-124155699 chr12:124155670-124155692 chr12:124155675-124155694 chr12:124155687-124155696 chr12:124155681-124155689 chr12:124155680-124155692 chr12:124155682-124155692 chr12:124155688-124155699 chr12:124155580-124155591
11	HCFC1	chr12:124155141-124156376	Hela-S3	cervix:	n/a	n/a
12	POLR2A	chr12:124155361-124155793	H1-hESC	embryonic stem cell:	n/a	n/a
13	MAFK	chr12:124155506-124155682	IMR90	lung:	n/a	n/a
14	FOS	chr12:124155418-124155612	MCF10A-Er-Src	breast:	n/a	n/a
15	POLR2A	chr12:124155315-124156204	K562	blood:	n/a	n/a
16	MXI1	chr12:124155472-124157083	IMR90	lung:	n/a	chr12:124155654-124155669
17	RFX5	chr12:124155472-124156034	GM12878	blood:	n/a	chr12:124155653-124155668 chr12:124155653-124155668 chr12:124155653-124155668 chr12:124155652-124155669
18	POLR2A	chr12:124155357-124155888	Hela-S3	cervix:	n/a	n/a
19	SIN3AK20	chr12:124155472-124156054	K562	blood:	n/a	n/a
20	SP1	chr12:124155414-124155795	HepG2	liver:	n/a	chr12:124155574-124155584 chr12:124155573-124155585 chr12:124155574-124155583 chr12:124155575-124155584 chr12:124155573-124155584 chr12:124155573-124155585 chr12:124155606-124155627 chr12:124155574-124155584
21	ELK1	chr12:124155474-124155594	Hela-S3	cervix:	n/a	n/a
22	NFYB	chr12:124155397-124156073	GM12878	blood:	n/a	chr12:124155641-124155656 chr12:124155602-124155617 chr12:124155643-124155658 chr12:124155641-124155656
23	POLR2A	chr12:124155344-124156219	K562	blood:	n/a	n/a
24	HEY1	chr12:124155347-124155832	HepG2	liver:	n/a	chr12:124155694-124155709
25	POLR2A	chr12:124155176-124156063	U87	brain:	n/a	n/a
26	TBP	chr12:124155388-124155726	K562	blood:	n/a	n/a
27	ELF1	chr12:124155506-124155925	K562	blood:	n/a	chr12:124155687-124155696 chr12:124155688-124155700 chr12:124155760-124155772
28	RCOR1	chr12:124155398-124156034	Hela-S3	cervix:	n/a	n/a
29	RFX5	chr12:124155352-124155668	K562	blood:	n/a	chr12:124155653-124155668 chr12:124155653-124155668 chr12:124155653-124155668
30	TBP	chr12:124155371-124155833	H1-hESC	embryonic stem cell:	n/a	n/a
31	SP1	chr12:124155301-124155998	A549	lung:	n/a	chr12:124155574-124155584 chr12:124155573-124155585 chr12:124155574-124155583 chr12:124155575-124155584 chr12:124155573-124155584 chr12:124155573-124155585 chr12:124155606-124155627 chr12:124155574-124155584
32	RUNX3	chr12:124155353-124155805	GM12878	blood:	n/a	n/a
33	ELF1	chr12:124155433-124156321	GM12878	blood:	n/a	chr12:124155687-124155696 chr12:124155688-124155700 chr12:124155760-124155772
34	POLR2A	chr12:124155297-124155890	HepG2	liver:	n/a	n/a
35	CHD2	chr12:124155426-124155905	Hela-S3	cervix:	n/a	n/a
36	NFYA	chr12:124155402-124155778	GM12878	blood:	n/a	chr12:124155641-124155656 chr12:124155637-124155655 chr12:124155605-124155623 chr12:124155641-124155656
37	POLR2A	chr12:124155363-124155924	HCT-116	colon:	n/a	n/a
38	YY1	chr12:124155347-124156061	GM12891	blood:	n/a	chr12:124155683-124155691 chr12:124155690-124155699 chr12:124155670-124155692 chr12:124155675-124155694 chr12:124155687-124155696 chr12:124155681-124155689 chr12:124155680-124155692 chr12:124155682-124155692 chr12:124155688-124155699 chr12:124155580-124155591
39	YY1	chr12:124155367-124156264	K562	blood:	n/a	chr12:124155683-124155691 chr12:124155690-124155699 chr12:124155670-124155692 chr12:124155675-124155694 chr12:124155687-124155696 chr12:124155681-124155689 chr12:124155680-124155692 chr12:124155682-124155692 chr12:124155688-124155699 chr12:124155580-124155591
40	POLR2A	chr12:124155287-124155887	ECC-1	luminal epithelium:	n/a	n/a
41	ZNF143	chr12:124155399-124155844	GM12878	blood:	n/a	n/a
42	MAZ	chr12:124155203-124156317	IMR90	lung:	n/a	chr12:124156248-124156258 chr12:124155654-124155663 chr12:124155574-124155584 chr12:124156185-124156195
43	NFYA	chr12:124155421-124156041	Hela-S3	cervix:	n/a	chr12:124155641-124155656 chr12:124155637-124155655 chr12:124155605-124155623 chr12:124155641-124155656
44	FOS	chr12:124155451-124155574	MCF10A-Er-Src	breast:	n/a	n/a
45	POLR2A	chr12:124155413-124155835	A549	lung:	n/a	n/a
46	SP1	chr12:124155364-124155844	GM12878	blood:	n/a	chr12:124155574-124155584 chr12:124155573-124155585 chr12:124155574-124155583 chr12:124155575-124155584 chr12:124155573-124155584 chr12:124155573-124155585 chr12:124155606-124155627 chr12:124155574-124155584
47	SP1	chr12:124155353-124155866	K562	blood:	n/a	chr12:124155574-124155584 chr12:124155573-124155585 chr12:124155574-124155583 chr12:124155575-124155584 chr12:124155573-124155584 chr12:124155573-124155585 chr12:124155606-124155627 chr12:124155574-124155584
48	YY1	chr12:124155331-124156023	ECC-1	luminal epithelium:	n/a	chr12:124155683-124155691 chr12:124155690-124155699 chr12:124155670-124155692 chr12:124155675-124155694 chr12:124155687-124155696 chr12:124155681-124155689 chr12:124155680-124155692 chr12:124155682-124155692 chr12:124155688-124155699 chr12:124155580-124155591
49	CHD2	chr12:124155466-124155802	GM12878	blood:	n/a	n/a
50	SIN3AK20	chr12:124155480-124155824	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:124155376..124157580-chr12:124194948..124197481,2	K562	blood:
2	chr12:124155020..124157089-chr12:124215035..124217819,2	MCF-7	breast:
3	chr12:124155436..124158746-chr12:124195101..124198299,4	MCF-7	breast:
4	chr12:124131124..124134135-chr12:124154416..124157411,3	K562	blood:
5	chr12:124116825..124119400-chr12:124154444..124157055,3	MCF-7	breast:

Variant related genes	Relation type
TCTN2	TF binding region
ENSG00000111361	Chromatin interaction
ENSG00000111358	Chromatin interaction
ENSG00000185344	Chromatin interaction

Extended variants
information (count: 218 )
Associated
traits (count: 17 )

rSNPs within LD-proxies of this variant (count:191)

rs_ID	r²[population]
rs10160937	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1040156	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1051793	0.88[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1060637	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1060639	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10732574	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10734903	0.83[ASN][1000 genomes]
rs10734905	0.81[CEU][hapmap];1.00[CHB][hapmap];0.88[GIH][hapmap];0.87[TSI][hapmap];0.83[ASN][1000 genomes]
rs10734906	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.83[ASN][1000 genomes]
rs10744157	0.83[ASN][1000 genomes]
rs10744158	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10744159	0.83[ASN][1000 genomes]
rs10744160	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap]
rs10744161	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10744162	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap]
rs10773026	0.83[ASN][1000 genomes]
rs10773030	0.83[ASN][1000 genomes]
rs10773034	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10846535	0.89[CEU][hapmap]
rs10846537	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10846549	0.86[ASN][1000 genomes]
rs10846550	0.81[ASN][1000 genomes]
rs10846553	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1139320	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1139789	0.83[ASN][1000 genomes]
rs11572920	0.88[CEU][hapmap];1.00[CHB][hapmap];0.83[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.87[TSI][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11572952	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11609591	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11610473	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11611354	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11611450	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11612030	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11612927	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11613632	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11614155	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11614468	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11614659	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11615162	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11829958	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11830462	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11831536	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11833604	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11834141	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11834492	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11834808	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11837144	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.83[ASN][1000 genomes]
rs12580486	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12811354	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12813758	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12817576	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12817757	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12818596	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12819746	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12820195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12821242	1.00[CEU][hapmap];0.81[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12822546	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12823866	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12824075	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12825800	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12827074	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12828408	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12828633	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12829893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12829984	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12830927	0.88[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.87[TSI][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12831081	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1399961	0.81[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.83[ASN][1000 genomes]
rs1515815	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.87[TSI][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1878077	0.85[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];0.85[GIH][hapmap];0.85[TSI][hapmap];0.83[ASN][1000 genomes]
rs1962020	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2176152	0.85[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.83[ASN][1000 genomes]
rs2203500	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2222060	0.81[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2250026	0.92[CEU][hapmap]
rs2271660	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2271661	0.83[ASN][1000 genomes]
rs2271662	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2333834	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2333836	0.83[ASN][1000 genomes]
rs2333838	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2333839	0.83[ASN][1000 genomes]
rs2333840	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs34534928	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34996665	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35114195	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35158437	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35416308	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35649708	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35804181	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35900897	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35911711	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35946281	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36018806	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3748269	0.85[CEU][hapmap]
rs3817309	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4456350	0.85[CEU][hapmap]
rs4930708	0.92[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6488888	0.96[CEU][hapmap];0.85[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6488891	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488892	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488894	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488897	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66471742	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66647364	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs66690784	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67178535	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67516712	0.84[EUR][1000 genomes]
rs7132115	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.83[ASN][1000 genomes]
rs7133199	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7133543	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7133734	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7134074	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7135267	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7135542	0.84[CEU][hapmap];1.00[CHB][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap]
rs7135660	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7136939	1.00[CEU][hapmap];0.82[CHB][hapmap];0.84[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7137946	0.92[CEU][hapmap]
rs7138503	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7139193	0.92[CEU][hapmap]
rs71458814	0.93[EUR][1000 genomes]
rs7294984	0.96[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7295552	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7296804	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7297576	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7298440	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7298831	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7300721	0.83[ASN][1000 genomes]
rs7301065	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7301641	0.85[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.90[TSI][hapmap];0.83[ASN][1000 genomes]
rs7302183	0.83[CEU][hapmap]
rs7302649	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7302708	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7302788	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7304052	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7304837	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7305701	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7305838	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7306549	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7307008	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7307343	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7308234	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7308398	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7308862	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7309528	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7310918	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7311789	0.83[ASN][1000 genomes]
rs7313032	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7313140	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7313261	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7313628	0.81[CEU][hapmap]
rs73219037	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7397160	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7397230	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7397745	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7397930	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7398082	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7398152	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7398298	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7399128	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7399224	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs786444	0.85[CEU][hapmap]
rs786448	0.85[CEU][hapmap]
rs7953596	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7953599	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7956751	0.83[ASN][1000 genomes]
rs7957429	1.00[ASN][1000 genomes]
rs7958693	0.96[CEU][hapmap];1.00[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7959553	1.00[CEU][hapmap];0.83[YRI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7960017	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7960403	0.83[ASN][1000 genomes]
rs7960951	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7963498	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7963968	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7964443	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7966867	0.92[CEU][hapmap]
rs7968029	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7969130	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7969234	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7969964	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7973155	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7973695	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7974279	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7974331	0.83[ASN][1000 genomes]
rs7975119	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7975233	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7978447	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7979528	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs882563	1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap]
rs968203	0.83[ASN][1000 genomes]
rs9787987	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050598	chr12:123991646-124214332	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	nsv541623	chr12:123991646-124214332	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
4	nsv1040356	chr12:124094758-124172731	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	22 gene(s)	inside rSNPs	diseases
5	esv2757517	chr12:124110122-124195856	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
6	esv2759918	chr12:124110122-124195856	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
7	nsv1041918	chr12:124115035-124184855	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
8	nsv1042866	chr12:124115035-124195856	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
9	nsv442292	chr12:124115047-124195854	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
10	esv35148	chr12:124119120-124196120	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
11	esv2756516	chr12:124119120-124196120	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
12	nsv1053101	chr12:124119155-124172731	Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	19 gene(s)	inside rSNPs	diseases
13	nsv524660	chr12:124119983-124194438	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
14	nsv455733	chr12:124119983-124195856	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
15	nsv560496	chr12:124119983-124195856	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
16	nsv1036843	chr12:124122376-124169697	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
17	nsv1052065	chr12:124127003-124157939	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
18	nsv1051385	chr12:124127003-124160021	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
19	nsv1053923	chr12:124127003-124162750	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
20	nsv1037556	chr12:124127003-124166978	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
21	nsv1043738	chr12:124127003-124169697	Strong transcription Weak transcription Active TSS ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
22	nsv1046151	chr12:124127003-124172731	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
23	nsv1045476	chr12:124127003-124174020	Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
24	nsv1055052	chr12:124127003-124176120	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
25	nsv1044734	chr12:124127003-124179417	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
26	nsv560497	chr12:124129460-124195856	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
27	nsv560498	chr12:124129924-124195856	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

mRNA abundance (count:17)

SNP	Gene	Cis/trans	Tissue	Source
rs11612479	TCTN2	cis	Artery Tibial	GTEx
rs11612479	DDX55	cis	parietal	SCAN
rs11612479	DDX55	cis	cerebellum	SCAN
rs11612479	TCTN2	cis	Thyroid	GTEx
rs11612479	TCTN2	cis	parietal	SCAN
rs11612479	DYNLL1	cis	parietal	SCAN
rs11612479	TCTN2	cis	lung	GTEx
rs11612479	ATP6V0A2	cis	Nerve Tibial	GTEx
rs11612479	TCTN2	cis	cerebellum	SCAN
rs11612479	CABP1	cis	cerebellum	SCAN
rs11612479	TCTN2	cis	Adipose Subcutaneous	GTEx
rs11612479	ATP6V0A2	cis	parietal	SCAN
rs11612479	TCTN2	cis	Esophagus Muscularis	GTEx
rs11612479	TCTN2	cis	Muscle Skeletal	GTEx
rs11612479	TCTN2	cis	Skin Sun Exposed Lower leg	GTEx
rs11612479	DDX55	cis	Esophagus Muscularis	GTEx
rs11612479	TCTN2	cis	Nerve Tibial	GTEx

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124131400-124155600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:124131400-124155600	Weak transcription	Right Ventricle	heart
3	chr12:124146200-124155600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:124155200-124155600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
5	chr12:124155200-124155600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr12:124155200-124155600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr12:124155200-124155600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr12:124155200-124155600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
9	chr12:124155200-124155600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr12:124155200-124155600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
11	chr12:124155200-124155600	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
12	chr12:124155200-124155600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
13	chr12:124155200-124155600	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr12:124155200-124155600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr12:124155200-124155600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr12:124155200-124155600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr12:124155200-124155600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr12:124155200-124155600	Flanking Active TSS	Brain Angular Gyrus	brain
19	chr12:124155200-124155600	Enhancers	Placenta	Placenta
20	chr12:124155200-124155600	Enhancers	Fetal Thymus	thymus
21	chr12:124155200-124155600	Flanking Active TSS	Rectal Smooth Muscle	rectum
22	chr12:124155200-124155600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
23	chr12:124155200-124155600	Flanking Active TSS	Stomach Smooth Muscle	stomach
24	chr12:124155200-124155600	Flanking Active TSS	GM12878-XiMat	blood
25	chr12:124155200-124155600	Flanking Active TSS	Hela-S3	cervix
26	chr12:124155200-124155600	Enhancers	HUVEC	blood vessel
27	chr12:124155200-124155600	Flanking Active TSS	K562	blood
28	chr12:124155200-124155600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
29	chr12:124155200-124155600	Flanking Active TSS	NH-A	brain
30	chr12:124155200-124155600	Flanking Active TSS	NHEK	skin
31	chr12:124155200-124155800	Active TSS	Brain Germinal Matrix	brain
32	chr12:124155200-124156000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
33	chr12:124155200-124156000	Active TSS	Brain Hippocampus Middle	brain
34	chr12:124155200-124156000	Active TSS	Ovary	ovary
35	chr12:124155200-124156200	Active TSS	H1 Cell Line	embryonic stem cell
36	chr12:124155200-124156200	Active TSS	Breast Myoepithelial Primary Cells	Breast
37	chr12:124155200-124156200	Active TSS	Brain Anterior Caudate	brain
38	chr12:124155200-124156200	Active TSS	Brain Inferior Temporal Lobe	brain
39	chr12:124155200-124156200	Active TSS	Brain Substantia Nigra	brain
40	chr12:124155200-124156200	Active TSS	Duodenum Smooth Muscle	Duodenum
41	chr12:124155200-124156200	Active TSS	Fetal Brain Female	brain
42	chr12:124155200-124156200	Active TSS	Placenta Amnion	Placenta Amnion
43	chr12:124155200-124156200	Active TSS	HepG2	liver
44	chr12:124155200-124156400	Active TSS	ES-I3 Cell Line	embryonic stem cell
45	chr12:124155200-124156400	Active TSS	iPS-15b Cell Line	embryonic stem cell
46	chr12:124155200-124156400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
47	chr12:124155200-124156400	Flanking Active TSS	Liver	Liver
48	chr12:124155200-124156400	Active TSS	Colon Smooth Muscle	Colon
49	chr12:124155200-124156400	Active TSS	Right Atrium	heart
50	chr12:124155200-124156600	Active TSS	HUES6 Cell Line	embryonic stem cell

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