Variant report

Variant	rs12817576
Chromosome Location	chr12:124126339-124126340
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:124125615..124128872-chr12:124133075..124135751,3	MCF-7	breast:
2	chr12:124123949..124126710-chr12:124128875..124131426,2	K562	blood:
3	chr12:124117107..124120837-chr12:124123304..124127842,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000111361	Chromatin interaction
ENSG00000111358	Chromatin interaction

Extended variants
information (count: 204 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:186)

rs_ID	r²[population]
rs10160842	0.80[ASN][1000 genomes]
rs10160937	0.86[ASN][1000 genomes]
rs1040156	0.86[ASN][1000 genomes]
rs1051793	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1060637	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1060639	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10732574	0.86[ASN][1000 genomes]
rs10734903	0.86[ASN][1000 genomes]
rs10734905	0.86[ASN][1000 genomes]
rs10734906	0.86[ASN][1000 genomes]
rs10734908	0.80[ASN][1000 genomes]
rs10744157	0.86[ASN][1000 genomes]
rs10744158	0.86[ASN][1000 genomes]
rs10744159	0.86[ASN][1000 genomes]
rs10744160	0.80[ASN][1000 genomes]
rs10773026	0.86[ASN][1000 genomes]
rs10773030	0.86[ASN][1000 genomes]
rs10773032	0.80[ASN][1000 genomes]
rs10773034	0.80[ASN][1000 genomes]
rs10846537	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10846549	0.90[ASN][1000 genomes]
rs10846550	0.84[ASN][1000 genomes]
rs1139320	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1139789	0.86[ASN][1000 genomes]
rs11572920	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11572952	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11609591	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11610473	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11611354	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11611450	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11612030	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11612479	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11612927	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11613632	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11614155	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11614468	0.96[ASN][1000 genomes]
rs11614659	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11615162	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11615300	0.86[EUR][1000 genomes]
rs11829958	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11830462	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11831536	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11833604	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11834141	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11834492	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11834808	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11837144	0.86[ASN][1000 genomes]
rs12580486	0.86[ASN][1000 genomes]
rs12811354	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12813758	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12817757	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12818596	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12819746	0.90[ASN][1000 genomes]
rs12820195	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12821242	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12822546	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12823866	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12824075	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12825800	0.90[ASN][1000 genomes]
rs12827074	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12828408	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12828633	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12829893	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12829984	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12830927	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12831081	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1399961	0.86[ASN][1000 genomes]
rs1515815	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1878077	0.86[ASN][1000 genomes]
rs1962020	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2176152	0.86[ASN][1000 genomes]
rs2203500	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2222060	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2271660	0.86[ASN][1000 genomes]
rs2271661	0.86[ASN][1000 genomes]
rs2271662	0.86[ASN][1000 genomes]
rs2333836	0.86[ASN][1000 genomes]
rs2333838	0.86[ASN][1000 genomes]
rs2333839	0.86[ASN][1000 genomes]
rs2333840	0.86[ASN][1000 genomes]
rs34247974	0.80[ASN][1000 genomes]
rs34534928	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34996665	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35114195	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35158437	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35416308	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35649708	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35804181	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35900897	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35911711	0.87[ASN][1000 genomes]
rs35946281	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36018806	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3817309	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4930708	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4930737	0.86[AFR][1000 genomes]
rs6488888	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6488891	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6488892	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6488893	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6488894	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6488897	0.90[ASN][1000 genomes]
rs6488899	0.80[ASN][1000 genomes]
rs66471742	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66647364	0.87[ASN][1000 genomes]
rs66690784	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67178535	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7132115	0.86[ASN][1000 genomes]
rs7133199	0.90[ASN][1000 genomes]
rs7133543	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7133734	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7134074	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7135267	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7135542	0.82[ASN][1000 genomes]
rs7135660	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7136939	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7138503	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs71458814	0.83[EUR][1000 genomes]
rs7294984	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7295552	0.86[ASN][1000 genomes]
rs7296804	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7297576	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7298440	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7298831	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7300721	0.86[ASN][1000 genomes]
rs7301065	0.82[ASN][1000 genomes]
rs7301641	0.86[ASN][1000 genomes]
rs7302649	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7302708	0.80[ASN][1000 genomes]
rs7302788	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7304052	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7304837	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7305701	0.90[ASN][1000 genomes]
rs7305838	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7306549	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7307008	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7307343	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7308234	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7308398	0.86[ASN][1000 genomes]
rs7308862	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7309528	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7310918	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7311789	0.86[ASN][1000 genomes]
rs7313032	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7313140	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7313261	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73219037	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7397160	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7397230	0.96[ASN][1000 genomes]
rs7397745	0.80[ASN][1000 genomes]
rs7397930	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7398082	0.86[ASN][1000 genomes]
rs7398152	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7398298	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7398606	0.80[ASN][1000 genomes]
rs7398641	0.80[ASN][1000 genomes]
rs7398851	0.80[ASN][1000 genomes]
rs7399128	0.86[ASN][1000 genomes]
rs7399224	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7953596	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7953599	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7956751	0.86[ASN][1000 genomes]
rs7957429	0.96[ASN][1000 genomes]
rs7958693	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7959553	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7960017	0.89[ASN][1000 genomes]
rs7960403	0.86[ASN][1000 genomes]
rs7960951	0.90[ASN][1000 genomes]
rs7963498	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7963968	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7964443	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7968029	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7969130	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7969234	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7969964	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7973155	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7973695	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7974279	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7974331	0.86[ASN][1000 genomes]
rs7975119	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7975233	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7978447	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7979528	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs882563	0.80[ASN][1000 genomes]
rs968203	0.86[ASN][1000 genomes]
rs9787987	0.86[ASN][1000 genomes]
rs9788204	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050598	chr12:123991646-124214332	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	nsv541623	chr12:123991646-124214332	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
4	nsv1042181	chr12:124037400-124152950	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
5	nsv1040356	chr12:124094758-124172731	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	22 gene(s)	inside rSNPs	diseases
6	esv2757517	chr12:124110122-124195856	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
7	esv2759918	chr12:124110122-124195856	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
8	nsv1041918	chr12:124115035-124184855	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	21 gene(s)	inside rSNPs	diseases
9	nsv1042866	chr12:124115035-124195856	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
10	nsv442292	chr12:124115047-124195854	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
11	esv35148	chr12:124119120-124196120	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
12	esv2756516	chr12:124119120-124196120	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
13	nsv1053101	chr12:124119155-124172731	Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	19 gene(s)	inside rSNPs	diseases
14	nsv524660	chr12:124119983-124194438	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
15	nsv455733	chr12:124119983-124195856	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
16	nsv560496	chr12:124119983-124195856	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
17	nsv1040119	chr12:124122376-124152950	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
18	nsv1036843	chr12:124122376-124169697	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs12817576	TCTN2	cis	lung	GTEx
rs12817576	ATP6V0A2	cis	Nerve Tibial	GTEx
rs12817576	TCTN2	cis	Adipose Subcutaneous	GTEx
rs12817576	TCTN2	cis	Artery Tibial	GTEx
rs12817576	TCTN2	cis	Muscle Skeletal	GTEx
rs12817576	TCTN2	cis	Esophagus Muscularis	GTEx
rs12817576	TCTN2	cis	Nerve Tibial	GTEx

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124119200-124129800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr12:124119200-124129800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr12:124119200-124130000	Weak transcription	Pancreas	Pancrea
4	chr12:124119200-124130200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:124119200-124130200	Weak transcription	Right Ventricle	heart
6	chr12:124119200-124141000	Weak transcription	Aorta	Aorta
7	chr12:124119200-124155200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr12:124119400-124127200	Weak transcription	Placenta	Placenta
9	chr12:124119400-124129600	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr12:124119400-124129600	Weak transcription	HSMMtube	muscle
11	chr12:124119400-124129800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr12:124119400-124129800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr12:124119400-124129800	Weak transcription	Lung	lung
14	chr12:124119400-124129800	Weak transcription	Ovary	ovary
15	chr12:124119400-124130200	Weak transcription	Fetal Kidney	kidney
16	chr12:124119400-124130200	Weak transcription	Gastric	stomach
17	chr12:124119400-124131200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr12:124119400-124132000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
19	chr12:124119600-124126600	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr12:124119600-124126600	Weak transcription	Primary hematopoietic stem cells	blood
21	chr12:124119600-124126600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr12:124119600-124126800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr12:124119600-124126800	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr12:124119600-124126800	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr12:124119600-124127000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr12:124119600-124127200	Weak transcription	Colon Smooth Muscle	Colon
27	chr12:124119600-124127800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
28	chr12:124119600-124128800	Weak transcription	Fetal Brain Female	brain
29	chr12:124119600-124129200	Weak transcription	Colonic Mucosa	Colon
30	chr12:124119600-124129200	Weak transcription	HSMM	muscle
31	chr12:124119600-124129600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr12:124119600-124129600	Weak transcription	Rectal Smooth Muscle	rectum
33	chr12:124119600-124129800	Weak transcription	Primary T helper cells PMA-I stimulated	--
34	chr12:124119600-124130000	Weak transcription	Primary neutrophils fromperipheralblood	blood
35	chr12:124119600-124139000	Weak transcription	Fetal Heart	heart
36	chr12:124119600-124140600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr12:124119600-124143000	Weak transcription	Pancreatic Islets	Pancreatic Islet
38	chr12:124119800-124126400	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr12:124119800-124126400	Weak transcription	Left Ventricle	heart
40	chr12:124119800-124126800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr12:124119800-124126800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr12:124119800-124126800	Weak transcription	A549	lung
43	chr12:124119800-124127000	Weak transcription	Rectal Mucosa Donor 29	rectum
44	chr12:124119800-124127200	Weak transcription	GM12878-XiMat	blood
45	chr12:124119800-124127200	Weak transcription	NHDF-Ad	bronchial
46	chr12:124119800-124127800	Weak transcription	Primary B cells from cord blood	blood
47	chr12:124119800-124127800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
48	chr12:124119800-124127800	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr12:124119800-124127800	Weak transcription	NHEK	skin
50	chr12:124119800-124129600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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