Variant report

Variant rs11638041
Chromosome Location chr15:39922675-39922676
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:39913200-39924000 Enhancers Rectal Mucosa Donor 31 rectum
2 chr15:39913400-39923800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
3 chr15:39914000-39922800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
4 chr15:39914600-39922800 Enhancers Primary T helper cells fromperipheralblood blood
5 chr15:39914600-39923600 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr15:39914600-39923600 Enhancers Primary T helper cells PMA-I stimulated --
7 chr15:39914600-39923800 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr15:39914800-39923800 Enhancers Primary T cells fromperipheralblood blood
9 chr15:39916000-39924000 Enhancers HMEC breast
10 chr15:39916200-39923400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr15:39916400-39937800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr15:39917400-39923800 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr15:39917600-39926200 Weak transcription Esophagus oesophagus
14 chr15:39918800-39923400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr15:39919400-39923000 Enhancers Fetal Brain Male brain
16 chr15:39920000-39923400 Enhancers Sigmoid Colon Sigmoid Colon
17 chr15:39920000-39923600 Enhancers HUVEC blood vessel
18 chr15:39920000-39924400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr15:39920200-39922800 Enhancers Fetal Thymus thymus
20 chr15:39920200-39924400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr15:39920600-39924200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr15:39920800-39922800 Enhancers Primary T cells from cord blood blood
23 chr15:39920800-39924400 Enhancers NHEK skin
24 chr15:39920800-39925200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr15:39921000-39922800 Enhancers Primary T regulatory cells fromperipheralblood blood
26 chr15:39921200-39923200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr15:39921200-39924400 Enhancers Fetal Heart heart
28 chr15:39921400-39924400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr15:39921400-39926200 Weak transcription Pancreas Pancrea
30 chr15:39921400-39937600 Weak transcription Psoas Muscle Psoas
31 chr15:39921600-39923200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr15:39921600-39924000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr15:39921800-39923000 Weak transcription Right Ventricle heart
34 chr15:39921800-39923000 Weak transcription HSMMtube muscle
35 chr15:39921800-39923200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:39922000-39923000 Weak transcription Small Intestine intestine
37 chr15:39922000-39923400 Weak transcription Osteobl bone
38 chr15:39922000-39923800 Weak transcription HSMM muscle
39 chr15:39922200-39923200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr15:39922200-39923200 Weak transcription Left Ventricle heart
41 chr15:39922200-39923200 Weak transcription Spleen Spleen
42 chr15:39922200-39923400 Weak transcription NH-A brain
43 chr15:39922200-39923600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr15:39922400-39923200 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr15:39922600-39922800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
46 chr15:39922600-39923600 Enhancers Colonic Mucosa Colon

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