Variant report

Variant rs12908846
Chromosome Location chr15:39910404-39910405
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:39904000-39913400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr15:39906600-39916000 Weak transcription Stomach Smooth Muscle stomach
3 chr15:39908600-39910800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr15:39908800-39911400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr15:39909200-39911000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr15:39909200-39913400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr15:39909400-39910600 Weak transcription Left Ventricle heart
8 chr15:39909800-39910600 Enhancers HMEC breast
9 chr15:39909800-39911000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr15:39909800-39911000 Enhancers Liver Liver
11 chr15:39909800-39913200 Weak transcription HUVEC blood vessel
12 chr15:39910000-39911000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr15:39910200-39910600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr15:39910200-39910600 Enhancers A549 lung
15 chr15:39910200-39910800 Enhancers Small Intestine intestine
16 chr15:39910200-39911000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr15:39910400-39911000 Flanking Active TSS NHEK skin

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