Variant report

Variant rs2898686
Chromosome Location chr15:39933913-39933914
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:39916400-39937800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr15:39921400-39937600 Weak transcription Psoas Muscle Psoas
3 chr15:39923800-39939600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:39926400-39934400 Weak transcription Pancreas Pancrea
5 chr15:39931400-39935600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr15:39931400-39937000 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr15:39932200-39934800 Enhancers Rectal Mucosa Donor 31 rectum
8 chr15:39932200-39935400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr15:39932600-39934800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr15:39932600-39935400 Enhancers HMEC breast
11 chr15:39932600-39935400 Enhancers HUVEC blood vessel
12 chr15:39932800-39934000 Enhancers Placenta Amnion Placenta Amnion
13 chr15:39932800-39934800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr15:39932800-39935200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr15:39933000-39934000 Flanking Active TSS Hela-S3 cervix
16 chr15:39933000-39935200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr15:39933000-39935400 Enhancers HUES64 Cell Line embryonic stem cell
18 chr15:39933000-39936000 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr15:39933200-39934600 Weak transcription Brain Anterior Caudate brain
20 chr15:39933200-39935400 Enhancers Colon Smooth Muscle Colon
21 chr15:39933400-39934000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr15:39933400-39934000 Active TSS Rectal Mucosa Donor 29 rectum
23 chr15:39933400-39934400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr15:39933400-39934400 Enhancers Muscle Satellite Cultured Cells --
25 chr15:39933400-39934800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr15:39933400-39934800 Flanking Active TSS NHEK skin
27 chr15:39933400-39935000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr15:39933400-39935000 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr15:39933400-39935200 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr15:39933400-39935400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr15:39933600-39934200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr15:39933600-39934200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr15:39933600-39934600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr15:39933600-39934800 Enhancers A549 lung
35 chr15:39933600-39935000 Enhancers Fetal Heart heart
36 chr15:39933600-39935000 Enhancers NHLF lung
37 chr15:39933600-39935200 Enhancers NH-A brain
38 chr15:39933600-39935400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr15:39933800-39934000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr15:39933800-39934000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr15:39933800-39934000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr15:39933800-39934000 Enhancers Skeletal Muscle Female skeletal muscle
43 chr15:39933800-39934200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr15:39933800-39934200 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr15:39933800-39934400 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr15:39933800-39934800 Enhancers H1 Cell Line embryonic stem cell
47 chr15:39933800-39934800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr15:39933800-39934800 Enhancers HUES48 Cell Line embryonic stem cell
49 chr15:39933800-39934800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr15:39933800-39934800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links