Variant report

Variant rs11070220
Chromosome Location chr15:39875383-39875384
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:39871600-39875400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr15:39871600-39875400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
3 chr15:39872400-39876600 Active TSS Duodenum Mucosa Duodenum
4 chr15:39872600-39876800 Active TSS Small Intestine intestine
5 chr15:39872600-39882400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
6 chr15:39872800-39875400 Active TSS Pancreatic Islets Pancreatic Islet
7 chr15:39872800-39875400 Active TSS Psoas Muscle Psoas
8 chr15:39872800-39875600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
9 chr15:39872800-39877200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr15:39872800-39881600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
11 chr15:39873400-39879200 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
12 chr15:39873400-39879400 Weak transcription Aorta Aorta
13 chr15:39873400-39879800 Transcr. at gene 5' and 3' NHDF-Ad bronchial
14 chr15:39873400-39880800 Transcr. at gene 5' and 3' NHLF lung
15 chr15:39873400-39881600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr15:39873400-39884200 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
17 chr15:39873400-39884200 Transcr. at gene 5' and 3' HUVEC blood vessel
18 chr15:39873400-39886800 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:39873600-39876000 Active TSS Fetal Brain Female brain
20 chr15:39873600-39878000 Transcr. at gene 5' and 3' NHEK skin
21 chr15:39873600-39882200 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
22 chr15:39873600-39882200 Transcr. at gene 5' and 3' HSMM muscle
23 chr15:39873600-39884000 Transcr. at gene 5' and 3' HMEC breast
24 chr15:39873600-39884000 Transcr. at gene 5' and 3' Osteobl bone
25 chr15:39873800-39878400 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
26 chr15:39874000-39875600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
27 chr15:39874000-39875600 Transcr. at gene 5' and 3' HepG2 liver
28 chr15:39874000-39876200 Transcr. at gene 5' and 3' A549 lung
29 chr15:39874000-39876400 Transcr. at gene 5' and 3' Fetal Lung lung
30 chr15:39874000-39876800 Transcr. at gene 5' and 3' Colon Smooth Muscle Colon
31 chr15:39874000-39877200 Transcr. at gene 5' and 3' Fetal Stomach stomach
32 chr15:39874000-39877800 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr15:39874000-39878000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 31 rectum
34 chr15:39874000-39879000 Transcr. at gene 5' and 3' Rectal Smooth Muscle rectum
35 chr15:39874000-39879400 Transcr. at gene 5' and 3' NH-A brain
36 chr15:39874000-39879800 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr15:39874200-39876200 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
38 chr15:39874200-39876200 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
39 chr15:39874200-39876600 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
40 chr15:39874200-39876600 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
41 chr15:39874200-39876800 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr15:39874200-39879200 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
43 chr15:39874200-39879400 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr15:39874400-39875400 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
45 chr15:39874400-39875400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
46 chr15:39874400-39875400 Transcr. at gene 5' and 3' Colonic Mucosa Colon
47 chr15:39874400-39875600 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr15:39874400-39876200 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
49 chr15:39874400-39876400 Transcr. at gene 5' and 3' Placenta Amnion Placenta Amnion
50 chr15:39874600-39875400 Transcr. at gene 5' and 3' Liver Liver

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