Variant report

Variant	rs2169830
Chromosome Location	chr15:39872056-39872057
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EGR1	chr15:39871514-39872072	MCF-7	breast:	n/a	chr15:39871858-39871869 chr15:39871856-39871870 chr15:39871858-39871868 chr15:39871857-39871870 chr15:39871858-39871868 chr15:39871858-39871869
2	NFIC	chr15:39871702-39872903	ECC-1	luminal epithelium:	n/a	n/a
3	SRF	chr15:39871707-39872374	ECC-1	luminal epithelium:	n/a	chr15:39871994-39872007 chr15:39871994-39872007 chr15:39871993-39872008 chr15:39871995-39872006 chr15:39871991-39872005 chr15:39871996-39872005 chr15:39871991-39872009 chr15:39871991-39872009 chr15:39871992-39872010 chr15:39871992-39872009 chr15:39871995-39872009 chr15:39871996-39872007
4	CTCF	chr15:39871980-39872130	AG04450	lung:	n/a	n/a
5	YY1	chr15:39871765-39872721	H1-hESC	embryonic stem cell:	n/a	chr15:39872660-39872674 chr15:39872654-39872668
6	CTCF	chr15:39871940-39872090	HUVEC	blood vessel:	n/a	n/a
7	TCF7L2	chr15:39871769-39872200	MCF-7	breast:	n/a	n/a
8	BHLHE40	chr15:39871769-39873546	HepG2	liver:	n/a	chr15:39873437-39873453 chr15:39873434-39873450 chr15:39873397-39873413 chr15:39872593-39872609
9	HA-E2F1	chr15:39871879-39873682	MCF-7	breast:	n/a	chr15:39872600-39872610 chr15:39873039-39873050 chr15:39872657-39872667 chr15:39873106-39873115
10	CEBPB	chr15:39871622-39873327	IMR90	lung:	n/a	n/a
11	POLR2A	chr15:39870897-39892463	HUVEC	blood vessel:	n/a	n/a
12	MAX	chr15:39871634-39873501	ECC-1	luminal epithelium:	n/a	chr15:39872697-39872706 chr15:39873005-39873014
13	POLR2A	chr15:39871748-39872253	HUVEC	blood vessel:	n/a	n/a
14	TCF12	chr15:39871518-39874274	A549	lung:	n/a	chr15:39874183-39874190
15	RAD21	chr15:39871967-39873023	HCT-116	colon:	n/a	chr15:39872590-39872600 chr15:39872814-39872824 chr15:39872530-39872549
16	POLR2A	chr15:39871542-39884619	MCF10A-Er-Src	breast:	n/a	n/a
17	RCOR1	chr15:39871893-39872755	HepG2	liver:	n/a	n/a
18	EP300	chr15:39871773-39873784	SK-N-SH	brain:	n/a	chr15:39872532-39872548 chr15:39871893-39871903 chr15:39872594-39872610 chr15:39873442-39873451 chr15:39873397-39873413 chr15:39873444-39873453 chr15:39873555-39873571
19	CREB1	chr15:39871656-39872814	H1-hESC	embryonic stem cell:	n/a	n/a
20	EGR1	chr15:39871706-39872083	H1-hESC	embryonic stem cell:	n/a	chr15:39871858-39871869 chr15:39871856-39871870 chr15:39871858-39871868 chr15:39871857-39871870 chr15:39871858-39871868 chr15:39871858-39871869
21	GATA2	chr15:39870911-39872650	HUVEC	blood vessel:	n/a	chr15:39871069-39871085 chr15:39872609-39872619 chr15:39871069-39871085 chr15:39871089-39871106
22	CHD1	chr15:39871089-39893027	IMR90	lung:	n/a	chr15:39872910-39872920
23	TEAD4	chr15:39871828-39872382	HCT-116	colon:	n/a	n/a
24	MAX	chr15:39871798-39873581	ECC-1	luminal epithelium:	n/a	chr15:39872697-39872706 chr15:39873005-39873014
25	BHLHE40	chr15:39871798-39872086	GM12878	blood:	n/a	n/a
26	TEAD4	chr15:39871808-39872712	HCT-116	colon:	n/a	n/a
27	ATF2	chr15:39871678-39872958	H1-hESC	embryonic stem cell:	n/a	n/a
28	CTCF	chr15:39871960-39872110	NHDF-neo	bronchial:	n/a	n/a
29	CHD2	chr15:39872018-39872241	HepG2	liver:	n/a	n/a
30	STAT3	chr15:39871696-39872197	MCF10A-Er-Src	breast:	n/a	chr15:39872107-39872121 chr15:39872108-39872119 chr15:39872110-39872119 chr15:39872109-39872118 chr15:39871871-39871882
31	MAX	chr15:39871620-39872362	H1-hESC	embryonic stem cell:	n/a	n/a
32	MYC	chr15:39872006-39872148	MCF-7	breast:	n/a	n/a
33	STAT3	chr15:39871527-39872592	MCF10A-Er-Src	breast:	n/a	chr15:39872107-39872121 chr15:39871631-39871640 chr15:39872267-39872275 chr15:39872108-39872119 chr15:39872110-39872119 chr15:39872109-39872118 chr15:39871632-39871641 chr15:39871871-39871882
34	MYC	chr15:39871445-39872589	MCF10A-Er-Src	breast:	n/a	n/a
35	MAFF	chr15:39871834-39872397	HepG2	liver:	n/a	n/a
36	YY1	chr15:39871844-39872305	ECC-1	luminal epithelium:	n/a	n/a
37	MAFK	chr15:39871850-39872619	H1-hESC	embryonic stem cell:	n/a	n/a
38	RFX5	chr15:39872021-39872763	HepG2	liver:	n/a	n/a
39	TEAD4	chr15:39871812-39872659	HepG2	liver:	n/a	n/a
40	MAX	chr15:39871668-39873495	HCT-116	colon:	n/a	chr15:39872697-39872706 chr15:39873005-39873014
41	SRF	chr15:39871794-39872198	H1-hESC	embryonic stem cell:	n/a	chr15:39871994-39872007 chr15:39871994-39872007 chr15:39871993-39872008 chr15:39871995-39872006 chr15:39871991-39872005 chr15:39871996-39872005 chr15:39871991-39872009 chr15:39871991-39872009 chr15:39871992-39872010 chr15:39871992-39872009 chr15:39871995-39872009 chr15:39871996-39872007
42	CTCF	chr15:39871980-39872130	AG04449	skin:	n/a	n/a
43	FOSL2	chr15:39871907-39872264	HepG2	liver:	n/a	n/a
44	CTCF	chr15:39871980-39872130	HMEC	breast:	n/a	n/a
45	ZNF217	chr15:39871778-39872205	MCF-7	breast:	n/a	n/a
46	SP1	chr15:39871761-39872302	A549	lung:	n/a	n/a
47	EGR1	chr15:39871528-39872618	HCT-116	colon:	n/a	chr15:39871858-39871869 chr15:39871856-39871870 chr15:39871858-39871868 chr15:39871857-39871870 chr15:39871858-39871868 chr15:39871858-39871869
48	CREB1	chr15:39871759-39872302	H1-hESC	embryonic stem cell:	n/a	n/a
49	MAZ	chr15:39870877-39886058	IMR90	lung:	n/a	chr15:39874192-39874207 chr15:39872697-39872706 chr15:39873005-39873014
50	FOS	chr15:39871415-39872575	HUVEC	blood vessel:	n/a	chr15:39871630-39871641

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:39872037-39872087	Hepatocyte	liver:	n/a
2	chr15:39872032-39872082	HRCEpiC	kidney:	n/a
3	chr15:39872037-39872087	HCF	heart:	n/a
4	chr15:39872037-39872087	HRCEpiC	kidney:	n/a
5	chr15:39872032-39872082	HCPEpiC	choroid plexus:	n/a
6	chr15:39872037-39872087	AG04450	lung:	fetal
7	chr15:39872032-39872082	HNPCEpiC	eye:	n/a
8	chr15:39872037-39872087	HAEpiC	amniotic membrane:	n/a
9	chr15:39872032-39872082	HMEC	breast:	n/a
10	chr15:39872037-39872087	LNCaP	prostate:	n/a
11	chr15:39872032-39872082	SK-N-SH_RA	brain:	n/a
12	chr15:39872032-39872082	PANC-1	pancreas:	n/a
13	chr15:39872032-39872082	AG09319	gingival:	n/a
14	chr15:39872037-39872087	PANC-1	pancreas:	n/a
15	chr15:39872032-39872082	SAEC	small airway:	n/a
16	chr15:39872037-39872087	HL-60	blood:	n/a
17	chr15:39872032-39872082	HIPEpiC	eye:	n/a
18	chr15:39872037-39872087	HPAEpiC	pulmonary alveolar:	n/a
19	chr15:39872037-39872087	GM06990	blood:	n/a
20	chr15:39872032-39872082	ProgFib	skin:	n/a
21	chr15:39872037-39872087	SK-N-MC	brain:	n/a
22	chr15:39872037-39872087	HCPEpiC	choroid plexus:	n/a
23	chr15:39872032-39872082	GM12892	blood:	n/a
24	chr15:39872032-39872082	AG10803	skin:	n/a
25	chr15:39872032-39872082	PrEC	prostate:	n/a
26	chr15:39872037-39872087	SK-N-SH_RA	brain:	n/a
27	chr15:39872037-39872087	AG09309	skin:	n/a
28	chr15:39872032-39872082	HRPEpiC	eye:	n/a
29	chr15:39872032-39872082	H1-hESC	embryonic stem cell:	embryo
30	chr15:39872037-39872087	HEK293	kidney:	embryo
31	chr15:39872032-39872082	MCF-7	breast:	n/a
32	chr15:39872037-39872087	T-47D	breast:	n/a
33	chr15:39872037-39872087	ProgFib	skin:	n/a
34	chr15:39872032-39872082	ECC-1	luminal epithelium:	n/a
35	chr15:39872037-39872087	AG09319	gingival:	n/a
36	chr15:39872032-39872082	GM19239	blood:	n/a
37	chr15:39872037-39872087	HMEC	breast:	n/a
38	chr15:39872037-39872087	SK-N-SH	brain:	n/a
39	chr15:39872037-39872087	RPTEC	kidney:	n/a
40	chr15:39872032-39872082	A549	lung:	n/a
41	chr15:39872032-39872082	IMR90	lung:	fetal
42	chr15:39872032-39872082	ovcar-3	ovarian:	n/a
43	chr15:39872037-39872087	GM12891	blood:	n/a
44	chr15:39872037-39872087	NB4	blood:	n/a
45	chr15:39872032-39872082	Hepatocyte	liver:	n/a
46	chr15:39872032-39872082	CMK	blood:	n/a
47	chr15:39872032-39872082	RPTEC	kidney:	n/a
48	chr15:39872032-39872082	HCF	heart:	n/a
49	chr15:39872032-39872082	T-47D	breast:	n/a
50	chr15:39872037-39872087	BE2_C	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:39462462..39474613-chr15:39871091..39879136,29	MCF-7	breast:
2	chr15:39561763..39569547-chr15:39871861..39876512,9	MCF-7	breast:
3	chr15:39604878..39605861-chr15:39871871..39872591,2	K562	blood:
4	chr15:39457550..39462148-chr15:39871822..39875383,4	MCF-7	breast:
5	chr15:39562139..39567868-chr15:39871478..39875404,11	MCF-7	breast:
6	chr15:39735362..39737088-chr15:39871158..39872700,2	MCF-7	breast:
7	chr15:39869641..39872520-chr15:39877889..39880142,2	K562	blood:

Variant related genes	Relation type
THBS1	TF binding region
THBS1	CpG island
ENSG00000137801	Chromatin interaction
ENSG00000259345	Chromatin interaction
ENSG00000259423	Chromatin interaction

Extended variants
information (count: 69 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs10152640	0.83[ASW][hapmap];1.00[CEU][hapmap];0.90[CHB][hapmap];0.88[CHD][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10520137	0.86[CHB][hapmap];0.81[CHD][hapmap];0.82[ASN][1000 genomes]
rs10520138	1.00[CEU][hapmap];0.90[CHB][hapmap];0.80[JPT][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11070220	0.90[CHB][hapmap];0.90[JPT][hapmap];0.88[ASN][1000 genomes]
rs11070221	0.81[ASN][1000 genomes]
rs11070222	0.86[CHB][hapmap];0.85[CHD][hapmap];0.80[JPT][hapmap];0.81[ASN][1000 genomes]
rs11070223	0.86[CHB][hapmap];0.81[ASN][1000 genomes]
rs11070224	0.81[ASN][1000 genomes]
rs11070225	0.86[CHB][hapmap];0.82[ASN][1000 genomes]
rs1134485	0.90[CHB][hapmap];0.88[CHD][hapmap];0.90[JPT][hapmap];0.91[ASN][1000 genomes]
rs1134486	0.86[ASN][1000 genomes]
rs11631820	0.84[CEU][hapmap]
rs11631824	0.84[CEU][hapmap]
rs11857819	0.82[ASN][1000 genomes]
rs12050804	0.84[CEU][hapmap];0.80[TSI][hapmap]
rs12443011	0.83[ASW][hapmap];1.00[CEU][hapmap];0.90[CHB][hapmap];0.88[CHD][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12908846	0.86[CHB][hapmap];0.81[CHD][hapmap];0.82[ASN][1000 genomes]
rs12910572	0.80[ASN][1000 genomes]
rs12912082	0.95[CHB][hapmap];0.90[CHD][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs1478604	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1478605	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16969386	0.86[CHB][hapmap];0.81[CHD][hapmap];0.82[ASN][1000 genomes]
rs16969395	0.85[ASN][1000 genomes]
rs16969410	0.81[CHB][hapmap];0.82[ASN][1000 genomes]
rs1876852	1.00[CEU][hapmap];0.89[MEX][hapmap];0.88[TSI][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1904209	0.88[ASN][1000 genomes]
rs2228261	0.86[CHB][hapmap];0.85[CHD][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2229364	0.86[ASN][1000 genomes]
rs2292305	0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs2411310	0.80[TSI][hapmap]
rs2411315	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2412412	1.00[CEU][hapmap];0.89[MEX][hapmap];0.88[TSI][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2412418	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2412419	0.86[CHB][hapmap];0.85[CHD][hapmap];0.80[JPT][hapmap]
rs2412420	0.81[ASN][1000 genomes]
rs2618162	0.83[ASW][hapmap];0.94[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.90[MKK][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2618163	0.94[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2664139	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2664141	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3743125	0.81[CHB][hapmap];0.83[CHD][hapmap];0.80[JPT][hapmap];0.87[ASN][1000 genomes]
rs4319740	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4493017	0.84[CEU][hapmap]
rs4505280	0.84[CEU][hapmap]
rs56938133	0.81[ASN][1000 genomes]
rs66781090	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs67239630	0.81[ASN][1000 genomes]
rs7167366	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7170682	0.92[ASN][1000 genomes]
rs7176721	0.84[AMR][1000 genomes]
rs7177324	0.82[ASN][1000 genomes]
rs7179293	0.83[ASW][hapmap];1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[CHD][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.95[TSI][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7183544	0.92[ASN][1000 genomes]
rs753598	0.86[ASN][1000 genomes]
rs753599	0.90[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs8032035	0.86[CHB][hapmap];0.80[JPT][hapmap];0.82[ASN][1000 genomes]
rs8034594	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[JPT][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8036376	0.90[CHB][hapmap];0.90[CHD][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs8036633	0.90[CHB][hapmap];0.90[JPT][hapmap];0.92[ASN][1000 genomes]
rs8039035	1.00[CEU][hapmap];0.94[CHB][hapmap];0.88[JPT][hapmap];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs949646	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs964424	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs970280	0.85[CHB][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9806365	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9806647	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049682	chr15:39657279-40027403	Enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv542361	chr15:39657279-40027403	Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	esv3373125	chr15:39691567-40061262	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv904094	chr15:39738006-39976057	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	nsv832977	chr15:39817512-39981520	Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2169830	CASC5	cis	parietal	SCAN

Chromatin state (count:114 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:39871200-39872200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr15:39871200-39872400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr15:39871200-39872400	Flanking Active TSS	HUVEC	blood vessel
4	chr15:39871200-39872400	Flanking Active TSS	Osteobl	bone
5	chr15:39871200-39872600	Enhancers	Lung	lung
6	chr15:39871400-39872200	Flanking Active TSS	HSMM	muscle
7	chr15:39871400-39872200	Flanking Active TSS	NHLF	lung
8	chr15:39871400-39872400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr15:39871400-39872400	Flanking Active TSS	NH-A	brain
10	chr15:39871400-39872600	Flanking Active TSS	NHEK	skin
11	chr15:39871400-39872800	Bivalent Enhancer	Fetal Thymus	thymus
12	chr15:39871400-39873000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
13	chr15:39871400-39873800	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr15:39871600-39872200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr15:39871600-39872400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr15:39871600-39872400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr15:39871600-39872400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr15:39871600-39872400	Flanking Active TSS	Liver	Liver
19	chr15:39871600-39872400	Flanking Bivalent TSS/Enh	Fetal Brain Male	brain
20	chr15:39871600-39872400	Flanking Active TSS	Fetal Lung	lung
21	chr15:39871600-39872400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
22	chr15:39871600-39872400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
23	chr15:39871600-39872400	Flanking Active TSS	HMEC	breast
24	chr15:39871600-39872600	Weak transcription	Small Intestine	intestine
25	chr15:39871600-39872800	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
26	chr15:39871600-39872800	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
27	chr15:39871600-39872800	Active TSS	Fetal Muscle Trunk	muscle
28	chr15:39871600-39873000	Flanking Active TSS	Adipose Nuclei	Adipose
29	chr15:39871600-39873000	Active TSS	Stomach Smooth Muscle	stomach
30	chr15:39871600-39873400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr15:39871600-39873600	Active TSS	Breast Myoepithelial Primary Cells	Breast
32	chr15:39871600-39873600	Active TSS	Brain Angular Gyrus	brain
33	chr15:39871600-39874000	Active TSS	Ovary	ovary
34	chr15:39871600-39874200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr15:39871600-39875400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr15:39871600-39875400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr15:39871800-39872200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
38	chr15:39871800-39872200	Enhancers	Primary neutrophils fromperipheralblood	blood
39	chr15:39871800-39872200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr15:39871800-39872200	Flanking Bivalent TSS/Enh	Brain Inferior Temporal Lobe	brain
41	chr15:39871800-39872200	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
42	chr15:39871800-39872200	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
43	chr15:39871800-39872200	Flanking Active TSS	Pancreas	Pancrea
44	chr15:39871800-39872200	Flanking Active TSS	Psoas Muscle	Psoas
45	chr15:39871800-39872200	Flanking Bivalent TSS/Enh	Stomach Mucosa	stomach
46	chr15:39871800-39872400	Flanking Active TSS	Brain Anterior Caudate	brain
47	chr15:39871800-39872400	Flanking Bivalent TSS/Enh	Brain Cingulate Gyrus	brain
48	chr15:39871800-39872400	Flanking Active TSS	Brain Substantia Nigra	brain
49	chr15:39871800-39872400	Flanking Active TSS	Duodenum Mucosa	Duodenum
50	chr15:39871800-39872400	Flanking Active TSS	Placenta	Placenta

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