Variant report
| Variant | rs11661757 |
|---|---|
| Chromosome Location | chr18:29959378-29959379 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:29950000-29966200 | Weak transcription | Fetal Brain Female | brain |
| 2 | chr18:29951800-29961800 | Weak transcription | Esophagus | oesophagus |
| 3 | chr18:29952800-29963600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr18:29952800-29964600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 5 | chr18:29952800-29973200 | Weak transcription | Fetal Stomach | stomach |
| 6 | chr18:29953000-29966600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr18:29953400-29966600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 8 | chr18:29954000-29974000 | Weak transcription | HSMMtube | muscle |
| 9 | chr18:29954200-29960000 | Weak transcription | Small Intestine | intestine |
| 10 | chr18:29954200-29961800 | Weak transcription | Gastric | stomach |
| 11 | chr18:29954200-29963200 | Weak transcription | HSMM | muscle |
| 12 | chr18:29954200-29970800 | Weak transcription | Fetal Intestine Large | intestine |
| 13 | chr18:29954200-29974400 | Weak transcription | Fetal Muscle Leg | muscle |
| 14 | chr18:29954400-29961600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr18:29954400-29961800 | Weak transcription | Aorta | Aorta |
| 16 | chr18:29954400-29962000 | Weak transcription | HUVEC | blood vessel |
| 17 | chr18:29954400-29962400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 18 | chr18:29954400-29962800 | Weak transcription | Brain Anterior Caudate | brain |
| 19 | chr18:29954400-29963000 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr18:29954400-29972600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 21 | chr18:29954600-29961600 | Weak transcription | NHEK | skin |
| 22 | chr18:29954600-29961800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 23 | chr18:29954600-29962600 | Weak transcription | Brain Angular Gyrus | brain |
| 24 | chr18:29954600-29962600 | Weak transcription | Brain Hippocampus Middle | brain |
| 25 | chr18:29954600-29963000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr18:29954600-29974200 | Weak transcription | Fetal Intestine Small | intestine |
| 27 | chr18:29955400-29965400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 28 | chr18:29955800-29971000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 29 | chr18:29957800-29959400 | Enhancers | Liver | Liver |
| 30 | chr18:29957800-29961000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr18:29958000-29959400 | Enhancers | Fetal Heart | heart |
| 32 | chr18:29958000-29960800 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 33 | chr18:29958000-29965600 | Weak transcription | Right Ventricle | heart |
| 34 | chr18:29958200-29959400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr18:29958200-29959400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 36 | chr18:29958200-29959400 | Enhancers | Adipose Nuclei | Adipose |
| 37 | chr18:29958200-29959400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr18:29958200-29962200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr18:29958800-29959400 | Enhancers | Left Ventricle | heart |
| 40 | chr18:29958800-29959400 | Enhancers | Right Atrium | heart |
| 41 | chr18:29958800-29965200 | Weak transcription | Fetal Brain Male | brain |
| 42 | chr18:29959000-29962200 | Weak transcription | Brain Substantia Nigra | brain |
| 43 | chr18:29959000-29962200 | Weak transcription | NH-A | brain |
| 44 | chr18:29959000-29962400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 45 | chr18:29959000-29963000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 46 | chr18:29959000-29966000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 47 | chr18:29959200-29960000 | Weak transcription | Pancreas | Pancrea |
| 48 | chr18:29959200-29960600 | Weak transcription | Stomach Mucosa | stomach |
| 49 | chr18:29959200-29961400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 50 | chr18:29959200-29961800 | Weak transcription | Ovary | ovary |
