Variant report

Variant rs11665783
Chromosome Location chr19:52517894-52517895
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52512000-52518200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr19:52512000-52518400 Weak transcription Fetal Heart heart
3 chr19:52512000-52518800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:52512000-52519000 Weak transcription NHDF-Ad bronchial
5 chr19:52512000-52525400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr19:52512200-52518200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr19:52512200-52518200 Weak transcription Fetal Kidney kidney
8 chr19:52512200-52518400 Weak transcription H1 Cell Line embryonic stem cell
9 chr19:52512200-52518400 Weak transcription NHEK skin
10 chr19:52512200-52518800 Weak transcription Osteobl bone
11 chr19:52512200-52519000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:52512200-52519000 Weak transcription Fetal Brain Male brain
13 chr19:52512200-52519200 Weak transcription Placenta Amnion Placenta Amnion
14 chr19:52512200-52519200 Weak transcription NHLF lung
15 chr19:52512200-52519400 Weak transcription Right Ventricle heart
16 chr19:52512200-52519600 Weak transcription Stomach Mucosa stomach
17 chr19:52512600-52518400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr19:52514000-52530400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr19:52514400-52522600 Strong transcription Brain Germinal Matrix brain
20 chr19:52515200-52519000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr19:52515200-52530800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr19:52515400-52522600 Strong transcription iPS-20b Cell Line embryonic stem cell
23 chr19:52515400-52530800 ZNF genes & repeats Primary B cells from cord blood blood
24 chr19:52515400-52546400 ZNF genes & repeats Liver Liver
25 chr19:52515600-52519400 Strong transcription Dnd41 blood
26 chr19:52515600-52529400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr19:52516000-52529000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
28 chr19:52516000-52529400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
29 chr19:52516200-52523400 Strong transcription Placenta Placenta
30 chr19:52516400-52518000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr19:52516400-52518000 Weak transcription Rectal Smooth Muscle rectum
32 chr19:52516400-52518400 Weak transcription H9 Cell Line embryonic stem cell
33 chr19:52516400-52518400 Weak transcription Fetal Thymus thymus
34 chr19:52516400-52518400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr19:52516400-52518400 Weak transcription Stomach Smooth Muscle stomach
36 chr19:52516400-52518600 Weak transcription Colonic Mucosa Colon
37 chr19:52516400-52518800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr19:52516400-52518800 Weak transcription Fetal Lung lung
39 chr19:52516400-52519000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr19:52516400-52519000 Weak transcription Pancreas Pancrea
41 chr19:52516400-52519400 Weak transcription Thymus Thymus
42 chr19:52516600-52519000 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr19:52516600-52520400 Weak transcription Fetal Stomach stomach
44 chr19:52517200-52523000 Strong transcription HUES6 Cell Line embryonic stem cell
45 chr19:52517200-52528800 ZNF genes & repeats Adipose Nuclei Adipose
46 chr19:52517200-52529200 ZNF genes & repeats Primary T cells from cord blood blood
47 chr19:52517400-52518800 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr19:52517400-52519000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr19:52517400-52519200 Strong transcription HepG2 liver
50 chr19:52517400-52519400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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