Variant report

Variant rs17835716
Chromosome Location chr19:52551042-52551043
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52538600-52551200 Weak transcription Hela-S3 cervix
2 chr19:52542600-52551200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:52544800-52551200 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:52544800-52551200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr19:52544800-52551200 Weak transcription Right Ventricle heart
6 chr19:52547800-52551200 ZNF genes & repeats GM12878-XiMat blood
7 chr19:52549400-52551600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr19:52549600-52551200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr19:52549600-52551200 Weak transcription Fetal Intestine Small intestine
10 chr19:52549800-52551200 Weak transcription Aorta Aorta
11 chr19:52549800-52551200 Weak transcription Colonic Mucosa Colon
12 chr19:52549800-52551200 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr19:52549800-52551200 Weak transcription Fetal Stomach stomach
14 chr19:52549800-52551200 Weak transcription Psoas Muscle Psoas
15 chr19:52549800-52551200 Weak transcription Rectal Smooth Muscle rectum
16 chr19:52549800-52551400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr19:52549800-52551400 Weak transcription Pancreas Pancrea
18 chr19:52550000-52551200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:52550000-52551200 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr19:52550000-52551200 Weak transcription Primary monocytes fromperipheralblood blood
21 chr19:52550000-52551200 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr19:52550000-52551200 Weak transcription Primary B cells from peripheral blood blood
23 chr19:52550000-52551200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr19:52550000-52551200 Weak transcription Brain Anterior Caudate brain
25 chr19:52550000-52551200 Weak transcription Brain Hippocampus Middle brain
26 chr19:52550000-52551200 Weak transcription Duodenum Mucosa Duodenum
27 chr19:52550000-52551200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr19:52550000-52551200 Weak transcription Thymus Thymus
29 chr19:52550000-52551200 Weak transcription K562 blood
30 chr19:52550000-52551400 Weak transcription Lung lung
31 chr19:52550000-52551600 Weak transcription Placenta Amnion Placenta Amnion
32 chr19:52550000-52551600 Weak transcription Spleen Spleen
33 chr19:52550200-52551200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr19:52550200-52551200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr19:52550200-52551200 Weak transcription Colon Smooth Muscle Colon
36 chr19:52550200-52551200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr19:52550200-52551200 Weak transcription Fetal Intestine Large intestine
38 chr19:52550200-52551200 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr19:52550200-52551200 Weak transcription HepG2 liver
40 chr19:52550200-52551200 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr19:52550200-52551200 Weak transcription NH-A brain
42 chr19:52550200-52551400 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr19:52550200-52551400 Weak transcription Brain Cingulate Gyrus brain
44 chr19:52550200-52551400 Weak transcription Placenta Placenta
45 chr19:52550400-52551200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr19:52550400-52551200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr19:52550400-52551200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr19:52550400-52551200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr19:52550400-52551200 Weak transcription Adipose Nuclei Adipose
50 chr19:52550400-52551200 Weak transcription Brain Angular Gyrus brain

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