The 2.0 version of rSNPBase

Variant report

Variant rs11666865
Chromosome Location chr19:28298186-28298187
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28285800-28303200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr19:28286000-28298400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr19:28286200-28298200 Weak transcription HSMMtube muscle
4 chr19:28286200-28298800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr19:28286200-28298800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr19:28286400-28299400 Weak transcription Brain Anterior Caudate brain
7 chr19:28286600-28298400 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr19:28286600-28299000 Weak transcription NHLF lung
9 chr19:28286600-28301000 Weak transcription Brain Substantia Nigra brain
10 chr19:28286800-28298400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr19:28286800-28299000 Weak transcription Stomach Smooth Muscle stomach
12 chr19:28286800-28299400 Weak transcription HSMM muscle
13 chr19:28287000-28298400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr19:28287000-28298400 Weak transcription Brain Angular Gyrus brain
15 chr19:28287000-28299000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr19:28287000-28299200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr19:28289400-28298400 Weak transcription Brain Cingulate Gyrus brain
18 chr19:28289800-28299000 Weak transcription Left Ventricle heart
19 chr19:28290000-28303200 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr19:28290000-28306000 Weak transcription K562 blood
21 chr19:28290200-28298400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:28290200-28298400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr19:28290200-28298800 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr19:28291200-28298600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr19:28292400-28299200 Weak transcription Primary B cells from peripheral blood blood
26 chr19:28295000-28299600 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr19:28295000-28304800 Weak transcription HMEC breast
28 chr19:28295200-28298400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr19:28296200-28298400 Weak transcription Fetal Lung lung
30 chr19:28296600-28298200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr19:28297000-28298600 Weak transcription Primary B cells from cord blood blood
32 chr19:28297000-28298600 Weak transcription Muscle Satellite Cultured Cells --
33 chr19:28297000-28298600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr19:28297000-28298800 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr19:28297000-28298800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr19:28297000-28298800 Weak transcription Dnd41 blood
37 chr19:28297000-28299000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr19:28297000-28304600 Weak transcription NHEK skin
39 chr19:28297200-28298400 Weak transcription Ovary ovary
40 chr19:28297200-28298400 Weak transcription Spleen Spleen
41 chr19:28297200-28298800 Weak transcription Primary T cells fromperipheralblood blood
42 chr19:28297200-28298800 Weak transcription Adipose Nuclei Adipose
43 chr19:28297200-28298800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr19:28297200-28299200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr19:28297200-28304800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr19:28297400-28299400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr19:28297600-28299200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr19:28297600-28299400 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr19:28297600-28299600 Weak transcription A549 lung
50 chr19:28297600-28301600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015