The 2.0 version of rSNPBase

Variant report

Variant rs73026867
Chromosome Location chr19:28270064-28270065
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28246600-28272000 ZNF genes & repeats Fetal Brain Female brain
2 chr19:28258800-28272000 ZNF genes & repeats Brain Germinal Matrix brain
3 chr19:28261600-28283400 Weak transcription Psoas Muscle Psoas
4 chr19:28262200-28271800 ZNF genes & repeats Aorta Aorta
5 chr19:28263600-28272000 ZNF genes & repeats Fetal Lung lung
6 chr19:28263800-28270400 ZNF genes & repeats A549 lung
7 chr19:28264000-28270400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr19:28264200-28272200 ZNF genes & repeats Fetal Stomach stomach
9 chr19:28264800-28281600 Weak transcription Muscle Satellite Cultured Cells --
10 chr19:28264800-28283600 Weak transcription Brain Substantia Nigra brain
11 chr19:28264800-28283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr19:28265000-28270200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr19:28265000-28271800 Weak transcription Right Ventricle heart
14 chr19:28265000-28272600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr19:28265000-28272600 Weak transcription Brain Angular Gyrus brain
16 chr19:28265000-28283400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr19:28265200-28276600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr19:28265200-28281600 Weak transcription HMEC breast
19 chr19:28265200-28283200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr19:28265200-28283600 Weak transcription Brain Hippocampus Middle brain
21 chr19:28266000-28270800 Weak transcription Primary B cells from cord blood blood
22 chr19:28266000-28282800 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr19:28266600-28271400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr19:28266600-28282200 Weak transcription Rectal Smooth Muscle rectum
25 chr19:28266600-28282600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr19:28266600-28283400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr19:28266800-28282800 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr19:28267200-28281600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr19:28267200-28281600 Weak transcription Dnd41 blood
30 chr19:28267400-28281600 Weak transcription K562 blood
31 chr19:28267800-28270200 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr19:28267800-28273000 Weak transcription Hela-S3 cervix
33 chr19:28267800-28283600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr19:28268400-28270400 Strong transcription Ovary ovary
35 chr19:28268400-28272600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr19:28268400-28282000 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr19:28268400-28284000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr19:28268600-28281600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:28268600-28282600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr19:28268600-28282600 Weak transcription HSMM muscle
41 chr19:28268600-28283600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr19:28268600-28283800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr19:28268800-28272200 Weak transcription Stomach Smooth Muscle stomach
44 chr19:28268800-28273200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr19:28269000-28271800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr19:28269000-28282800 Weak transcription Liver Liver
47 chr19:28269000-28283200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr19:28269000-28283800 Weak transcription Left Ventricle heart
49 chr19:28269200-28270200 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr19:28269400-28272600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015