Variant report

Variant rs11669934
Chromosome Location chr19:20987583-20987584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
2 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
3 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:20974800-20992000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:20975200-20989400 ZNF genes & repeats Primary hematopoietic stem cells blood
7 chr19:20975200-20992000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
8 chr19:20975600-20989200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr19:20976600-20990800 ZNF genes & repeats Dnd41 blood
10 chr19:20976800-20990800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
11 chr19:20977000-20991200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
12 chr19:20977600-20991000 ZNF genes & repeats Primary T cells from cord blood blood
13 chr19:20977800-20990200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
14 chr19:20978400-20991200 ZNF genes & repeats H1 Cell Line embryonic stem cell
15 chr19:20978800-20987600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr19:20979800-20987600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr19:20981200-20991400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr19:20982800-20990800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
19 chr19:20982800-20991200 ZNF genes & repeats Duodenum Mucosa Duodenum
20 chr19:20983000-20987600 Weak transcription Brain Anterior Caudate brain
21 chr19:20983400-20988000 Weak transcription Brain Hippocampus Middle brain
22 chr19:20983600-20988000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr19:20984400-20988800 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
24 chr19:20984400-20990800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
25 chr19:20985800-20988400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
26 chr19:20986400-20989000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr19:20986400-20989400 ZNF genes & repeats Primary T cells fromperipheralblood blood
28 chr19:20986400-20990800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
29 chr19:20986400-20991000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr19:20986600-20987600 Weak transcription HSMM muscle
31 chr19:20986600-20989800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
32 chr19:20986600-20990000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr19:20986800-20987600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr19:20987000-20988200 ZNF genes & repeats Right Ventricle heart
35 chr19:20987000-20988200 ZNF genes & repeats Thymus Thymus
36 chr19:20987000-20988400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr19:20987000-20988400 ZNF genes & repeats H9 Cell Line embryonic stem cell
38 chr19:20987000-20988400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
39 chr19:20987000-20988400 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
40 chr19:20987000-20990800 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
41 chr19:20987000-20991000 ZNF genes & repeats Brain Germinal Matrix brain
42 chr19:20987000-20991000 ZNF genes & repeats Ovary ovary
43 chr19:20987000-20991400 ZNF genes & repeats Adipose Nuclei Adipose
44 chr19:20987200-20988200 ZNF genes & repeats Small Intestine intestine
45 chr19:20987200-20988400 ZNF genes & repeats Pancreas Pancrea
46 chr19:20987200-20988400 ZNF genes & repeats Psoas Muscle Psoas
47 chr19:20987200-20988800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
48 chr19:20987200-20988800 ZNF genes & repeats Aorta Aorta
49 chr19:20987200-20988800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
50 chr19:20987200-20989000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --

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