The 2.0 version of rSNPBase

Variant report

Variant rs11676866
Chromosome Location chr2:152628858-152628859
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:152611000-152632400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:152614600-152638000 Weak transcription Pancreas Pancrea
3 chr2:152616800-152644400 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:152616800-152662400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr2:152617000-152632600 Weak transcription Brain Hippocampus Middle brain
6 chr2:152617000-152638000 Weak transcription Esophagus oesophagus
7 chr2:152617000-152669400 Weak transcription Gastric stomach
8 chr2:152618200-152631200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:152619000-152677400 Weak transcription Brain Substantia Nigra brain
10 chr2:152619800-152635800 Weak transcription Fetal Brain Female brain
11 chr2:152620200-152632000 Enhancers Primary B cells from cord blood blood
12 chr2:152622000-152632800 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr2:152622000-152632800 Weak transcription Thymus Thymus
14 chr2:152622200-152632200 Weak transcription Fetal Intestine Large intestine
15 chr2:152622200-152661800 Weak transcription Fetal Kidney kidney
16 chr2:152622600-152633000 Weak transcription Right Ventricle heart
17 chr2:152622600-152633800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr2:152622800-152629600 Enhancers Primary B cells from peripheral blood blood
19 chr2:152623000-152680000 Weak transcription Spleen Spleen
20 chr2:152623200-152638000 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr2:152623400-152631800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr2:152623400-152632400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr2:152623400-152632600 Weak transcription Fetal Thymus thymus
24 chr2:152623400-152635800 Weak transcription Primary hematopoietic stem cells blood
25 chr2:152623400-152658800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr2:152623400-152659000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr2:152623600-152633800 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:152623600-152659000 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr2:152623800-152631600 Weak transcription Lung lung
30 chr2:152623800-152633600 Weak transcription Fetal Intestine Small intestine
31 chr2:152623800-152635800 Weak transcription Brain Anterior Caudate brain
32 chr2:152623800-152642000 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr2:152624000-152633400 Weak transcription Primary T cells fromperipheralblood blood
34 chr2:152624000-152662600 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr2:152624200-152630600 Weak transcription NH-A brain
36 chr2:152624200-152632200 Weak transcription Primary monocytes fromperipheralblood blood
37 chr2:152624200-152632200 Weak transcription Left Ventricle heart
38 chr2:152624200-152632400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:152624200-152632400 Weak transcription Fetal Muscle Trunk muscle
40 chr2:152624200-152633400 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr2:152624200-152641400 Weak transcription Brain Angular Gyrus brain
42 chr2:152624200-152643000 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr2:152624400-152631400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr2:152624400-152635800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:152624400-152656800 Weak transcription HepG2 liver
46 chr2:152625400-152660000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr2:152625600-152632600 Weak transcription Ovary ovary
48 chr2:152626200-152632200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr2:152626600-152629200 Enhancers Psoas Muscle Psoas
50 chr2:152626800-152633600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015