The 2.0 version of rSNPBase

Variant report

Variant rs13016166
Chromosome Location chr2:152624144-152624145
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:152611000-152632400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:152614600-152638000 Weak transcription Pancreas Pancrea
3 chr2:152616800-152644400 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:152616800-152662400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr2:152617000-152632600 Weak transcription Brain Hippocampus Middle brain
6 chr2:152617000-152638000 Weak transcription Esophagus oesophagus
7 chr2:152617000-152669400 Weak transcription Gastric stomach
8 chr2:152618200-152631200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:152618400-152625200 Strong transcription Aorta Aorta
10 chr2:152619000-152677400 Weak transcription Brain Substantia Nigra brain
11 chr2:152619800-152635800 Weak transcription Fetal Brain Female brain
12 chr2:152620200-152632000 Enhancers Primary B cells from cord blood blood
13 chr2:152620800-152624800 Enhancers HUVEC blood vessel
14 chr2:152621200-152624200 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr2:152621600-152627800 Weak transcription Stomach Smooth Muscle stomach
16 chr2:152622000-152624200 Enhancers Fetal Lung lung
17 chr2:152622000-152632800 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr2:152622000-152632800 Weak transcription Thymus Thymus
19 chr2:152622200-152624200 Enhancers Left Ventricle heart
20 chr2:152622200-152624400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:152622200-152624400 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr2:152622200-152624800 Enhancers Right Atrium heart
23 chr2:152622200-152625200 Enhancers Psoas Muscle Psoas
24 chr2:152622200-152632200 Weak transcription Fetal Intestine Large intestine
25 chr2:152622200-152661800 Weak transcription Fetal Kidney kidney
26 chr2:152622400-152624200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:152622400-152624200 Enhancers GM12878-XiMat blood
28 chr2:152622400-152624400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:152622400-152624800 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr2:152622600-152633000 Weak transcription Right Ventricle heart
31 chr2:152622600-152633800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr2:152622800-152624400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:152622800-152625200 Enhancers Skeletal Muscle Female skeletal muscle
34 chr2:152622800-152629600 Enhancers Primary B cells from peripheral blood blood
35 chr2:152623000-152624200 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr2:152623000-152624200 Strong transcription Primary monocytes fromperipheralblood blood
37 chr2:152623000-152624400 Enhancers HepG2 liver
38 chr2:152623000-152680000 Weak transcription Spleen Spleen
39 chr2:152623200-152624400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr2:152623200-152624400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:152623200-152624400 Enhancers NHDF-Ad bronchial
42 chr2:152623200-152624600 Enhancers HSMMtube muscle
43 chr2:152623200-152638000 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr2:152623400-152624200 Weak transcription Osteobl bone
45 chr2:152623400-152624800 Enhancers A549 lung
46 chr2:152623400-152626200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr2:152623400-152631800 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr2:152623400-152632400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr2:152623400-152632600 Weak transcription Fetal Thymus thymus
50 chr2:152623400-152635800 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015