The 2.0 version of rSNPBase

Variant report

Variant rs1168944
Chromosome Location chr12:121326772-121326773
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121288200-121339600 Weak transcription Hela-S3 cervix
2 chr12:121294200-121340400 Weak transcription HSMM muscle
3 chr12:121297400-121339800 Weak transcription A549 lung
4 chr12:121300600-121328800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr12:121302000-121328800 Weak transcription Fetal Intestine Large intestine
6 chr12:121304200-121329800 Weak transcription K562 blood
7 chr12:121304600-121339800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr12:121306600-121331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr12:121310800-121331400 Weak transcription Fetal Muscle Leg muscle
10 chr12:121312600-121339800 Weak transcription Brain Germinal Matrix brain
11 chr12:121312600-121339800 Weak transcription NHDF-Ad bronchial
12 chr12:121313000-121332600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr12:121313400-121330000 Weak transcription Psoas Muscle Psoas
14 chr12:121313400-121332400 Weak transcription Lung lung
15 chr12:121313400-121339800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr12:121313400-121339800 Weak transcription Pancreas Pancrea
17 chr12:121315400-121332200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr12:121315800-121331400 Weak transcription Fetal Stomach stomach
19 chr12:121317200-121333400 Weak transcription Brain Cingulate Gyrus brain
20 chr12:121317400-121338000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr12:121317600-121331400 Weak transcription HepG2 liver
22 chr12:121317600-121339600 Weak transcription HMEC breast
23 chr12:121317800-121339600 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr12:121318200-121339600 Weak transcription NHEK skin
25 chr12:121318200-121340400 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr12:121320800-121328600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr12:121320800-121328800 Weak transcription Liver Liver
28 chr12:121322400-121326800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr12:121322600-121327000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr12:121322600-121327200 Enhancers Primary T helper cells PMA-I stimulated --
31 chr12:121322800-121327200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr12:121323000-121327400 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr12:121323200-121340000 Weak transcription Fetal Lung lung
34 chr12:121323400-121328800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr12:121323600-121330000 Weak transcription Brain Angular Gyrus brain
36 chr12:121323600-121330000 Weak transcription Right Ventricle heart
37 chr12:121323600-121331400 Weak transcription Brain Hippocampus Middle brain
38 chr12:121323600-121332200 Weak transcription Stomach Mucosa stomach
39 chr12:121323600-121340600 Weak transcription Aorta Aorta
40 chr12:121324000-121340400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr12:121324200-121326800 Weak transcription Colon Smooth Muscle Colon
42 chr12:121324400-121327200 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr12:121324400-121328600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr12:121324400-121328600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr12:121324400-121330000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr12:121324400-121330000 Weak transcription Brain Inferior Temporal Lobe brain
47 chr12:121324400-121331400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr12:121324400-121334000 Weak transcription Small Intestine intestine
49 chr12:121324400-121339600 Weak transcription Brain Substantia Nigra brain
50 chr12:121324400-121339800 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015