The 2.0 version of rSNPBase

Variant report

Variant rs2461475
Chromosome Location chr12:121290174-121290175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121269800-121291400 Weak transcription Fetal Intestine Large intestine
2 chr12:121274200-121291800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr12:121274800-121291800 Weak transcription Dnd41 blood
4 chr12:121281600-121296200 Weak transcription HepG2 liver
5 chr12:121282000-121308600 Weak transcription Fetal Kidney kidney
6 chr12:121283200-121291200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr12:121283200-121310200 Weak transcription Placenta Placenta
8 chr12:121283400-121291800 Weak transcription Pancreas Pancrea
9 chr12:121283400-121307400 Weak transcription Esophagus oesophagus
10 chr12:121283600-121290800 Weak transcription Gastric stomach
11 chr12:121283600-121295600 Weak transcription Fetal Stomach stomach
12 chr12:121283600-121302200 Weak transcription Lung lung
13 chr12:121284000-121294400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr12:121284600-121292800 Enhancers Primary B cells from peripheral blood blood
15 chr12:121285000-121290800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr12:121286000-121291800 Weak transcription Fetal Intestine Small intestine
17 chr12:121286200-121291400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr12:121286400-121290800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr12:121286400-121291000 Weak transcription Primary hematopoietic stem cells blood
20 chr12:121286400-121291000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr12:121286400-121291200 Weak transcription K562 blood
22 chr12:121286400-121293800 Weak transcription Right Ventricle heart
23 chr12:121286600-121293600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr12:121286800-121291200 Weak transcription Primary T cells from cord blood blood
25 chr12:121287600-121293400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr12:121287600-121294000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr12:121287800-121290200 Enhancers Primary monocytes fromperipheralblood blood
28 chr12:121287800-121290800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr12:121287800-121300400 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr12:121288000-121290800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr12:121288000-121291000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr12:121288000-121291000 Weak transcription Muscle Satellite Cultured Cells --
33 chr12:121288000-121291000 Weak transcription Adipose Nuclei Adipose
34 chr12:121288000-121291000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr12:121288000-121292800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr12:121288000-121293400 Weak transcription Brain Substantia Nigra brain
37 chr12:121288000-121294400 Weak transcription Right Atrium heart
38 chr12:121288000-121294600 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr12:121288000-121300200 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr12:121288000-121311800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr12:121288000-121316600 Weak transcription NHLF lung
42 chr12:121288200-121290200 Enhancers NHEK skin
43 chr12:121288200-121290800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr12:121288200-121290800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:121288200-121291000 Weak transcription Rectal Smooth Muscle rectum
46 chr12:121288200-121291000 Weak transcription Osteobl bone
47 chr12:121288200-121291400 Weak transcription Placenta Amnion Placenta Amnion
48 chr12:121288200-121293800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr12:121288200-121339600 Weak transcription Hela-S3 cervix
50 chr12:121288400-121291000 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015