The 2.0 version of rSNPBase

Variant report

Variant rs548452
Chromosome Location chr12:121320606-121320607
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121288200-121339600 Weak transcription Hela-S3 cervix
2 chr12:121294200-121340400 Weak transcription HSMM muscle
3 chr12:121297400-121339800 Weak transcription A549 lung
4 chr12:121300600-121328800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr12:121302000-121328800 Weak transcription Fetal Intestine Large intestine
6 chr12:121304200-121329800 Weak transcription K562 blood
7 chr12:121304600-121339800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr12:121304800-121322000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr12:121304800-121324200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr12:121306000-121322800 Weak transcription Primary B cells from cord blood blood
11 chr12:121306600-121326600 Weak transcription Fetal Intestine Small intestine
12 chr12:121306600-121331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr12:121308800-121323200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr12:121310800-121323600 Weak transcription Fetal Thymus thymus
15 chr12:121310800-121331400 Weak transcription Fetal Muscle Leg muscle
16 chr12:121311200-121322400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr12:121311200-121323200 Weak transcription Thymus Thymus
18 chr12:121311400-121321800 Weak transcription Primary T cells from cord blood blood
19 chr12:121311400-121323000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr12:121311400-121323800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr12:121312000-121323200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr12:121312000-121323400 Weak transcription Primary hematopoietic stem cells blood
23 chr12:121312000-121323400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr12:121312600-121339800 Weak transcription Brain Germinal Matrix brain
25 chr12:121312600-121339800 Weak transcription NHDF-Ad bronchial
26 chr12:121312800-121321600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr12:121312800-121322800 Weak transcription GM12878-XiMat blood
28 chr12:121313000-121321600 Weak transcription Primary T cells fromperipheralblood blood
29 chr12:121313000-121322600 Weak transcription Brain Angular Gyrus brain
30 chr12:121313000-121322800 Weak transcription Primary B cells from peripheral blood blood
31 chr12:121313000-121323200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr12:121313000-121323400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr12:121313000-121325800 Weak transcription Ovary ovary
34 chr12:121313000-121332600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr12:121313400-121323200 Weak transcription Brain Substantia Nigra brain
36 chr12:121313400-121330000 Weak transcription Psoas Muscle Psoas
37 chr12:121313400-121332400 Weak transcription Lung lung
38 chr12:121313400-121339800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr12:121313400-121339800 Weak transcription Pancreas Pancrea
40 chr12:121313600-121322800 Weak transcription Brain Hippocampus Middle brain
41 chr12:121314000-121324000 Weak transcription Duodenum Mucosa Duodenum
42 chr12:121315400-121322600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr12:121315400-121332200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr12:121315800-121331400 Weak transcription Fetal Stomach stomach
45 chr12:121317200-121333400 Weak transcription Brain Cingulate Gyrus brain
46 chr12:121317400-121338000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr12:121317600-121331400 Weak transcription HepG2 liver
48 chr12:121317600-121339600 Weak transcription HMEC breast
49 chr12:121317800-121322800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr12:121317800-121324000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015