The 2.0 version of rSNPBase

Variant report

Variant rs572016
Chromosome Location chr12:121279083-121279084
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121267200-121282800 Weak transcription Fetal Muscle Trunk muscle
2 chr12:121267600-121285800 Weak transcription Colonic Mucosa Colon
3 chr12:121269800-121281200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr12:121269800-121281200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr12:121269800-121282800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr12:121269800-121291400 Weak transcription Fetal Intestine Large intestine
7 chr12:121272800-121285600 Weak transcription Hela-S3 cervix
8 chr12:121273400-121281200 Weak transcription K562 blood
9 chr12:121273800-121280200 Weak transcription HSMMtube muscle
10 chr12:121273800-121282800 Weak transcription Fetal Stomach stomach
11 chr12:121274000-121279400 Weak transcription Brain Anterior Caudate brain
12 chr12:121274000-121284000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr12:121274000-121285800 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr12:121274000-121287200 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr12:121274200-121279400 Weak transcription Brain Cingulate Gyrus brain
16 chr12:121274200-121279600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr12:121274200-121279600 Weak transcription Brain Angular Gyrus brain
18 chr12:121274200-121280400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr12:121274200-121282200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr12:121274200-121291800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr12:121274400-121280400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr12:121274400-121280400 Weak transcription Right Atrium heart
23 chr12:121274400-121280600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr12:121274400-121282000 Weak transcription Stomach Smooth Muscle stomach
25 chr12:121274400-121282200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr12:121274400-121282600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr12:121274400-121282800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr12:121274400-121282800 Weak transcription Brain Germinal Matrix brain
29 chr12:121274400-121284800 Weak transcription Primary B cells from cord blood blood
30 chr12:121274400-121285200 Weak transcription Primary hematopoietic stem cells blood
31 chr12:121274400-121285200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr12:121274400-121285400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr12:121274400-121285400 Weak transcription Aorta Aorta
34 chr12:121274400-121285800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr12:121274400-121289400 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr12:121274600-121279400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr12:121274600-121279400 Weak transcription Adipose Nuclei Adipose
38 chr12:121274600-121279400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr12:121274600-121279400 Weak transcription Brain Substantia Nigra brain
40 chr12:121274600-121279600 Weak transcription Liver Liver
41 chr12:121274600-121281200 Weak transcription Primary T cells fromperipheralblood blood
42 chr12:121274600-121281200 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr12:121274600-121281600 Weak transcription Lung lung
44 chr12:121274600-121282000 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr12:121274600-121282200 Weak transcription Spleen Spleen
46 chr12:121274600-121282800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr12:121274600-121282800 Weak transcription Fetal Muscle Leg muscle
48 chr12:121274600-121285200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr12:121274600-121289000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr12:121274600-121289800 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015