Variant report

Variant	rs11696050
Chromosome Location	chr2:209362156-209362157
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10175430	0.84[ASN][1000 genomes]
rs10932262	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11682951	0.81[ASN][1000 genomes]
rs11688433	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12105866	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1370374	0.85[ASN][1000 genomes]
rs2014411	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2061013	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34242215	0.85[ASN][1000 genomes]
rs36089579	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3820904	0.87[ASN][1000 genomes]
rs4675768	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4675770	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4675772	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6726003	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6754577	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7575183	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7604108	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs879707	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209355200-209366000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr2:209361200-209365800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr2:209361200-209365800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr2:209361200-209366000	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr2:209361400-209366200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr2:209361600-209364800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr2:209361600-209366000	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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