Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:16589932..16591784-chr20:16595469..16597980,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10485558	0.83[TSI][hapmap];0.81[EUR][1000 genomes]
rs11698735	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11699391	0.95[EUR][1000 genomes]
rs17675229	0.81[EUR][1000 genomes]
rs17675340	0.81[EUR][1000 genomes]
rs17681859	0.95[EUR][1000 genomes]
rs17744425	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17744455	1.00[EUR][1000 genomes]
rs6034525	0.81[EUR][1000 genomes]
rs6034526	0.81[EUR][1000 genomes]
rs6044093	0.81[EUR][1000 genomes]
rs6044099	0.83[TSI][hapmap];0.81[EUR][1000 genomes]
rs6044101	0.81[EUR][1000 genomes]
rs6044105	0.81[EUR][1000 genomes]
rs6044108	0.81[EUR][1000 genomes]
rs6044167	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.81[LWK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6044172	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6044179	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6111185	0.81[EUR][1000 genomes]
rs62196260	0.81[EUR][1000 genomes]
rs62196283	0.81[EUR][1000 genomes]
rs62196284	0.81[EUR][1000 genomes]
rs62196286	0.81[EUR][1000 genomes]
rs62196289	0.81[EUR][1000 genomes]
rs62196304	0.81[EUR][1000 genomes]
rs62196305	0.81[EUR][1000 genomes]
rs62196307	0.81[EUR][1000 genomes]
rs62196308	0.81[EUR][1000 genomes]
rs62196310	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525956	chr20:16593159-16601519	ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:16590000-16602400	Weak transcription	Right Atrium	heart
2	chr20:16596400-16597800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr20:16596600-16600200	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr20:16596800-16598000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr20:16596800-16598000	Weak transcription	Duodenum Mucosa	Duodenum
6	chr20:16597000-16600800	Weak transcription	Small Intestine	intestine
7	chr20:16597400-16598600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr20:16597600-16598400	ZNF genes & repeats	Fetal Lung	lung

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