Variant report

Variant	rs11715684
Chromosome Location	chr3:25113555-25113556
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11129178	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12639346	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17015760	0.87[AFR][1000 genomes]
rs4858695	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6550939	0.80[EUR][1000 genomes]
rs6550941	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6786779	0.80[EUR][1000 genomes]
rs7619139	0.81[ASN][1000 genomes]
rs9310769	0.80[EUR][1000 genomes]
rs9811936	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9820531	0.80[EUR][1000 genomes]
rs9820537	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9823025	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs992844	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs993803	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs993805	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25111400-25115600	Weak transcription	Fetal Lung	lung
2	chr3:25113400-25113600	Enhancers	Placenta Amnion	Placenta Amnion
3	chr3:25113400-25114000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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