Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:25105659..25107199-chr3:25110702..25113407,2	K562	blood:
2	chr3:25109117..25112751-chr3:25632559..25635347,3	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11129178	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11715684	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12486699	0.83[AFR][1000 genomes]
rs12639346	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1603989	0.81[AFR][1000 genomes]
rs1609936	0.80[AFR][1000 genomes]
rs1609938	0.84[AFR][1000 genomes]
rs4858695	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4858699	0.85[AFR][1000 genomes]
rs6550939	0.80[EUR][1000 genomes]
rs6550941	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6786779	0.80[EUR][1000 genomes]
rs6798255	0.81[AFR][1000 genomes]
rs7626290	0.92[AFR][1000 genomes]
rs7630907	0.84[AFR][1000 genomes]
rs9310769	0.80[EUR][1000 genomes]
rs9811936	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9820531	0.80[EUR][1000 genomes]
rs9820537	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9823025	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs992844	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs993803	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834644	chr3:24936987-25112610	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv589955	chr3:24987823-25113358	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25111400-25115600	Weak transcription	Fetal Lung	lung
2	chr3:25111800-25112400	Weak transcription	Colon Smooth Muscle	Colon
3	chr3:25111800-25113400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr3:25112000-25113000	Weak transcription	Placenta Amnion	Placenta Amnion

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