Variant report

Variant	rs11737705
Chromosome Location	chr4:76530121-76530122
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:76529277..76531401-chr4:76541879..76544287,2	K562	blood:
2	chr4:76524649..76527101-chr4:76529272..76531389,2	K562	blood:
3	chr4:76527827..76530761-chr4:76647722..76649257,2	K562	blood:

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs11097070	0.84[EUR][1000 genomes]
rs11736474	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs13116639	0.84[EUR][1000 genomes]
rs13118426	0.84[EUR][1000 genomes]
rs13133699	0.85[AFR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13137468	0.84[EUR][1000 genomes]
rs13138717	0.84[EUR][1000 genomes]
rs13140908	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1464070	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1464071	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1546539	0.84[EUR][1000 genomes]
rs1548175	0.84[EUR][1000 genomes]
rs1553984	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1553986	0.84[EUR][1000 genomes]
rs1967495	0.84[EUR][1000 genomes]
rs1967496	0.84[EUR][1000 genomes]
rs3796473	0.86[EUR][1000 genomes]
rs3796485	0.84[EUR][1000 genomes]
rs3796488	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3853183	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4337757	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4349625	0.84[EUR][1000 genomes]
rs4859403	0.84[EUR][1000 genomes]
rs4859537	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4859542	0.85[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs4859543	0.84[EUR][1000 genomes]
rs4859544	0.81[EUR][1000 genomes]
rs4859545	0.81[EUR][1000 genomes]
rs4859546	0.84[EUR][1000 genomes]
rs4859547	0.84[EUR][1000 genomes]
rs4859548	0.84[EUR][1000 genomes]
rs6531778	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6531841	0.84[EUR][1000 genomes]
rs6531866	0.84[EUR][1000 genomes]
rs6531867	0.83[EUR][1000 genomes]
rs6531868	0.83[EUR][1000 genomes]
rs6827809	0.82[EUR][1000 genomes]
rs6829402	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6832912	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6835702	0.84[EUR][1000 genomes]
rs6858741	0.81[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7659408	0.84[EUR][1000 genomes]
rs7672378	0.84[EUR][1000 genomes]
rs7674328	0.85[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7685459	0.85[AFR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7691765	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879495	chr4:76493256-76585823	Strong transcription Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv879496	chr4:76493256-76620803	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	nsv879497	chr4:76519096-76620803	Weak transcription Active TSS Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
4	esv1795456	chr4:76521217-76545465	Enhancers Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv1793652	chr4:76521217-76581775	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:76504400-76535200	Weak transcription	Aorta	Aorta
2	chr4:76509600-76532200	Weak transcription	Lung	lung
3	chr4:76509800-76530600	Weak transcription	Brain Anterior Caudate	brain
4	chr4:76520000-76537200	Weak transcription	Brain Substantia Nigra	brain
5	chr4:76523800-76531600	Weak transcription	Brain Hippocampus Middle	brain
6	chr4:76526200-76554400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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